Orthogroup:group_1566


Homologs in group_1566

Help

7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_10150 FBDBKF_10150 Morganella morganii S1 nrdE class 1b ribonucleoside-diphosphate reductase subunit alpha
EHELCC_04950 EHELCC_04950 Morganella morganii S2 nrdE class 1b ribonucleoside-diphosphate reductase subunit alpha
NLDBIP_04950 NLDBIP_04950 Morganella morganii S4 nrdE class 1b ribonucleoside-diphosphate reductase subunit alpha
LHKJJB_13680 LHKJJB_13680 Morganella morganii S3 nrdE class 1b ribonucleoside-diphosphate reductase subunit alpha
HKOGLL_12855 HKOGLL_12855 Morganella morganii S5 nrdE class 1b ribonucleoside-diphosphate reductase subunit alpha
F4V73_RS00190 F4V73_RS00190 Morganella psychrotolerans nrdE class 1b ribonucleoside-diphosphate reductase subunit alpha
PMI_RS02040 PMI_RS02040 Proteus mirabilis HI4320 nrdE class 1b ribonucleoside-diphosphate reductase subunit alpha

Distribution of group_1566 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_1566 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1566

Orthogroup content: 7 members

Help

This page summarizes the annotation of all members of the orthologous group group_1566.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 nrdE 7

Product

# Product Occurence
1 class 1b ribonucleoside-diphosphate reductase subunit alpha 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0209 7 F Nucleotide transport and metabolism (F) Ribonucleotide reductase alpha subunit

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00317 7 Ribonucleotide reductase, all-alpha domain
PF02867 7 Ribonucleotide reductase, barrel domain
PF08343 7 Ribonucleotide reductase N-terminal

Annotations of the 91 SwissProt hits

Annotation Number of occurrences
Probable cytochrome P450 522A1 1
Putative ribonucleoside-diphosphate reductase large subunit 1
Ribonucleoside-diphosphate reductase 1 subunit alpha 2
Ribonucleoside-diphosphate reductase 2 subunit alpha 2
Ribonucleoside-diphosphate reductase NrdEB subunit alpha 1
Ribonucleoside-diphosphate reductase large chain 4
Ribonucleoside-diphosphate reductase large chain 1 1
Ribonucleoside-diphosphate reductase large chain 2 1
Ribonucleoside-diphosphate reductase large subunit 44
Ribonucleoside-diphosphate reductase nrdEB subunit alpha 1
Ribonucleoside-diphosphate reductase subunit alpha 20
Ribonucleoside-diphosphate reductase subunit alpha 1 1
Ribonucleoside-diphosphate reductase subunit alpha 2 1
Vitamin B12-dependent ribonucleoside-diphosphate reductase 4
Vitamin B12-dependent ribonucleotide reductase 7

Protein length

Min length 706
Max length 708
Mean length (sd) 706.3 (0.8)
Median length 706.0

Protein length distribution