K01823


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K01823, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 12 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K01823
KO K01823
Description isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]

KO part of 3 pathways

Terpenoid backbone biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites

KO part of 7 modules

M00095 Terpenoid backbone biosynthesis C5 isoprenoid biosynthesis, mevalonate pathway
M00096 Terpenoid backbone biosynthesis C5 isoprenoid biosynthesis, non-mevalonate pathway
M00364 Terpenoid backbone biosynthesis C10-C20 isoprenoid biosynthesis, bacteria
M00365 Terpenoid backbone biosynthesis C10-C20 isoprenoid biosynthesis, archaea
M00366 Terpenoid backbone biosynthesis C10-C20 isoprenoid biosynthesis, plants
M00367 Terpenoid backbone biosynthesis C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
M00849 Terpenoid backbone biosynthesis C5 isoprenoid biosynthesis, mevalonate pathway, archaea

Occurence in the database

K01823 is associated with 12 different proteins (see tab "Protein list" and "Profile")
The 12 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1709 PMI_RS13640 3031590 3032126 1 idi isopentenyl-diphosphate Delta-isomerase Proteus mirabilis HI4320
1 group_1709 FBDBKF_11910 32458 32979 1 idi isopentenyl-diphosphate Delta-isomerase Morganella morganii S1
2 group_1709 EHELCC_14395 101726 102247 -1 idi isopentenyl-diphosphate Delta-isomerase Morganella morganii S2
3 group_1709 NLDBIP_15490 105663 106184 -1 idi isopentenyl-diphosphate Delta-isomerase Morganella morganii S4
4 group_1709 LHKJJB_15120 32458 32979 1 idi isopentenyl-diphosphate Delta-isomerase Morganella morganii S3
5 group_1709 HKOGLL_14240 19121 19642 1 idi isopentenyl-diphosphate Delta-isomerase Morganella morganii S5
6 group_1907 FBDBKF_14220 44059 44634 -1 yfcD NUDIX hydrolase YfcD Morganella morganii S1
7 group_1907 EHELCC_08060 72351 72926 1 yfcD NUDIX hydrolase YfcD Morganella morganii S2
8 group_1907 NLDBIP_08385 72351 72926 1 yfcD NUDIX hydrolase YfcD Morganella morganii S4
9 group_1907 LHKJJB_05880 184233 184808 -1 yfcD NUDIX hydrolase YfcD Morganella morganii S3
10 group_1907 HKOGLL_05035 56942 57517 1 yfcD NUDIX hydrolase YfcD Morganella morganii S5
11 group_1709 F4V73_RS14745 184324 184860 -1 idi isopentenyl-diphosphate Delta-isomerase Morganella psychrotolerans