K01778


Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Kegg Ortholog K01778
Protein list: lists the 7 occurences of the Kegg Ortholog within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Kegg Ortholog of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Ortholog has been clustered.
Orthogroups are shown in red if they are annotated with that particular Kegg Ortholog in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Kegg Ortholog prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Ortholog.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Ortholog prediction.

Description

External link K01778
KO K01778
Description diaminopimelate epimerase [EC:5.1.1.7]

KO part of 6 pathways

Lysine biosynthesis
D-Amino acid metabolism
Metabolic pathways
Biosynthesis of secondary metabolites
Microbial metabolism in diverse environments
Biosynthesis of amino acids

KO part of 3 modules

M00016 Lysine metabolism Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
M00525 Lysine metabolism Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine
M00527 Lysine metabolism Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine

Occurence in the database

K01778 is associated with 7 different proteins
The 7 proteins are classified into 1 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1403 FBDBKF_08345 44247 45071 1 dapF diaminopimelate epimerase Morganella morganii S1
1 group_1403 EHELCC_13180 118654 119478 -1 dapF diaminopimelate epimerase Morganella morganii S2
2 group_1403 NLDBIP_13520 118654 119478 -1 dapF diaminopimelate epimerase Morganella morganii S4
3 group_1403 LHKJJB_13035 42965 43789 1 dapF diaminopimelate epimerase Morganella morganii S3
4 group_1403 HKOGLL_11995 118654 119478 -1 dapF diaminopimelate epimerase Morganella morganii S5
5 group_1403 F4V73_RS09545 8953 9777 1 dapF diaminopimelate epimerase Morganella psychrotolerans
6 group_1403 PMI_RS16595 3658454 3659278 1 dapF diaminopimelate epimerase Proteus mirabilis HI4320