Orthogroup:group_1403


Homologs in group_1403

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_08665 FBDBKF_08665 Morganella morganii S1 nusA Transcription antitermination factor NusA, contains S1 and KH domains
EHELCC_12860 EHELCC_12860 Morganella morganii S2 nusA Transcription antitermination factor NusA, contains S1 and KH domains
NLDBIP_13200 NLDBIP_13200 Morganella morganii S4 nusA Transcription antitermination factor NusA, contains S1 and KH domains
LHKJJB_13355 LHKJJB_13355 Morganella morganii S3 nusA Transcription antitermination factor NusA, contains S1 and KH domains
HKOGLL_11675 HKOGLL_11675 Morganella morganii S5 nusA Transcription antitermination factor NusA, contains S1 and KH domains
F4V73_RS09890 F4V73_RS09890 Morganella psychrotolerans nusA transcription termination factor NusA
PMI_RS17020 PMI_RS17020 Proteus mirabilis HI4320 nusA transcription termination factor NusA

Distribution of group_1403 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1403 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1403

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1403.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 nusA 7

Product

# Product Occurence
1 Transcription antitermination factor NusA, contains S1 and KH domains 5
2 transcription termination factor NusA 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0195 7 K Transcription (K) Transcription antitermination factor NusA, contains S1 and KH domains

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02600 7 transcription termination/antitermination protein NusA - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00575 6 S1 RNA binding domain
PF08529 7 NusA N-terminal domain
PF13184 7 NusA-like KH domain
PF14520 7 Helix-hairpin-helix domain

Annotations of the 29 SwissProt hits

Annotation Number of occurrences
Probable transcription termination protein NusA 5
Transcription termination/antitermination protein NusA 24

Protein length

Min length 502
Max length 503
Mean length (sd) 502.9 (0.4)
Median length 503.0

Protein length distribution