K01696


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K01696, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K01696
KO K01696
Description tryptophan synthase beta chain [EC:4.2.1.20]

KO part of 5 pathways

Glycine, serine and threonine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
Biosynthesis of amino acids

KO part of 1 modules

M00023 Aromatic amino acid metabolism Tryptophan biosynthesis, chorismate => tryptophan

Occurence in the database

K01696 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_948 PMI_RS06500 1426151 1427341 1 trpB tryptophan synthase subunit beta Proteus mirabilis HI4320
1 group_948 FBDBKF_05175 42964 44154 1 trpB tryptophan synthase subunit beta Morganella morganii S1
2 group_948 EHELCC_12415 137340 138530 -1 trpB tryptophan synthase subunit beta Morganella morganii S2
3 group_948 NLDBIP_12755 137295 138485 -1 trpB tryptophan synthase subunit beta Morganella morganii S4
4 group_948 LHKJJB_12615 137340 138530 -1 trpB tryptophan synthase subunit beta Morganella morganii S3
5 group_948 HKOGLL_11230 137340 138530 -1 trpB tryptophan synthase subunit beta Morganella morganii S5
6 group_948 F4V73_RS05630 1198193 1199383 1 trpB tryptophan synthase subunit beta Morganella psychrotolerans