K00275


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K00275, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K00275
KO K00275
Description pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]

KO part of 4 pathways

Vitamin B6 metabolism
Metabolic pathways
Microbial metabolism in diverse environments
Biosynthesis of cofactors

KO part of 1 modules

M00124 Cofactor and vitamin metabolism Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P

Occurence in the database

K00275 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1015 PMI_RS06700 1465561 1466214 -1 pdxH pyridoxamine 5'-phosphate oxidase Proteus mirabilis HI4320
1 group_1015 FBDBKF_05670 141625 142275 -1 pdxH pyridoxamine 5'-phosphate oxidase Morganella morganii S1
2 group_1015 EHELCC_11920 39219 39869 1 pdxH pyridoxamine 5'-phosphate oxidase Morganella morganii S2
3 group_1015 NLDBIP_12260 39174 39824 1 pdxH pyridoxamine 5'-phosphate oxidase Morganella morganii S4
4 group_1015 LHKJJB_12120 39219 39869 1 pdxH pyridoxamine 5'-phosphate oxidase Morganella morganii S3
5 group_1015 HKOGLL_10735 39219 39869 1 pdxH pyridoxamine 5'-phosphate oxidase Morganella morganii S5
6 group_1015 F4V73_RS03635 772688 773338 1 pdxH pyridoxamine 5'-phosphate oxidase Morganella psychrotolerans