COG5463


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG5463, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Uncharacterized conserved protein YgiB, UPF0441/DUF1190 family, involved in bioifilm formation
Function(s) descr. Function unknown (S)

Occurence in the database

COG5463 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1111 FBDBKF_06335 101561 102238 1 ygiB DUF1190 domain-containing protein Morganella morganii S1
1 group_1111 EHELCC_09380 102133 102810 1 ygiB DUF1190 domain-containing protein Morganella morganii S2
2 group_1111 NLDBIP_09760 102133 102810 1 ygiB DUF1190 domain-containing protein Morganella morganii S4
3 group_1111 LHKJJB_07995 114428 115105 -1 ygiB DUF1190 domain-containing protein Morganella morganii S3
4 group_1111 HKOGLL_07545 114428 115105 -1 ygiB DUF1190 domain-containing protein Morganella morganii S5
5 group_1111 F4V73_RS15585 111838 112521 -1 DUF1190 family protein Morganella psychrotolerans
6 group_1111 PMI_RS11625 2569099 2569827 1 DUF1190 family protein Proteus mirabilis HI4320