COG5266


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG5266, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 12 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Uncharacterized protein, contains GH25 family domain
Function(s) descr. General function prediction only (R)

Occurence in the database

COG5266 is associated with 12 different proteins (see tab "Protein list" and "Profile")
The 12 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2854 FBDBKF_10840 135567 136079 -1 nikL Additional component NikL of nickel ECF transporter Morganella morganii S1
1 group_2855 FBDBKF_10845 136089 136778 -1 Uncharacterized protein, contains GH25 family domain Morganella morganii S1
2 group_2854 EHELCC_19425 6353 6865 -1 nikL Additional component NikL of nickel ECF transporter Morganella morganii S2
3 group_2855 EHELCC_19430 6875 7564 -1 Uncharacterized protein, contains GH25 family domain Morganella morganii S2
4 group_2854 NLDBIP_15005 135557 136069 -1 nikL Additional component NikL of nickel ECF transporter Morganella morganii S4
5 group_2855 NLDBIP_15010 136079 136768 -1 Uncharacterized protein, contains GH25 family domain Morganella morganii S4
6 group_2855 LHKJJB_14335 4958 5647 1 Uncharacterized protein, contains GH25 family domain Morganella morganii S3
7 group_2854 LHKJJB_14340 5657 6169 1 nikL Additional component NikL of nickel ECF transporter Morganella morganii S3
8 group_2855 HKOGLL_12955 4958 5647 1 Uncharacterized protein, contains GH25 family domain Morganella morganii S5
9 group_2854 HKOGLL_12960 5657 6169 1 nikL Additional component NikL of nickel ECF transporter Morganella morganii S5
10 group_2855 F4V73_RS16905 4836 5525 1 DUF4198 domain-containing protein Morganella psychrotolerans
11 group_2854 F4V73_RS16910 5535 6038 1 Additional component NikL of nickel ECF transporter Morganella psychrotolerans