COG4992


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG4992, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Acetylornithine/succinyldiaminopimelate/putrescine aminotransferase
Function(s) descr. Amino acid transport and metabolism (E)

Occurence in the database

COG4992 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1699 FBDBKF_11850 20252 21472 -1 astC Acetylornithine/succinyldiaminopimelate/putrescin e aminotransferase Morganella morganii S1
1 group_1699 EHELCC_14455 113233 114453 1 astC Acetylornithine/succinyldiaminopimelate/putrescin e aminotransferase Morganella morganii S2
2 group_1699 NLDBIP_15550 117170 118390 1 astC Acetylornithine/succinyldiaminopimelate/putrescin e aminotransferase Morganella morganii S4
3 group_1699 LHKJJB_15060 20252 21472 -1 astC Acetylornithine/succinyldiaminopimelate/putrescin e aminotransferase Morganella morganii S3
4 group_1699 HKOGLL_14180 6915 8135 -1 astC Acetylornithine/succinyldiaminopimelate/putrescin e aminotransferase Morganella morganii S5
5 group_1699 F4V73_RS14800 196066 197286 1 aspartate aminotransferase family protein Morganella psychrotolerans
6 group_1699 PMI_RS13935 3094525 3095742 -1 acetylornithine/succinyldiaminopimelate transaminase Proteus mirabilis HI4320