COG4750


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG4750, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description CTP:phosphocholine cytidylyltransferase LicC
Function(s) descr. Cell wall/membrane/envelope biogenesis (M)
Lipid transport and metabolism (I)

Occurence in the database

COG4750 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2896 FBDBKF_12350 133827 134513 1 CTP--phosphocholine cytidylyltransferase Morganella morganii S1
1 group_2896 EHELCC_13955 192 878 -1 CTP--phosphocholine cytidylyltransferase Morganella morganii S2
2 group_2896 NLDBIP_15050 4129 4815 -1 CTP--phosphocholine cytidylyltransferase Morganella morganii S4
3 group_2896 LHKJJB_15560 133827 134513 1 CTP--phosphocholine cytidylyltransferase Morganella morganii S3
4 group_2896 HKOGLL_14680 120490 121176 1 CTP--phosphocholine cytidylyltransferase Morganella morganii S5
5 group_2896 F4V73_RS17180 68291 68989 1 NTP transferase domain-containing protein Morganella psychrotolerans