COG4658


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG4658, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Na+-translocating ferredoxin:NAD+ oxidoreductase RNF, RnfD subunit
Function(s) descr. Energy production and conversion (C)

Occurence in the database

COG4658 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_928 FBDBKF_05040 14509 15603 1 rsxD electron transport complex subunit RsxD Morganella morganii S1
1 group_928 EHELCC_12550 165891 166985 -1 rsxD electron transport complex subunit RsxD Morganella morganii S2
2 group_928 NLDBIP_12890 165846 166940 -1 rsxD electron transport complex subunit RsxD Morganella morganii S4
3 group_928 LHKJJB_12750 165891 166985 -1 rsxD electron transport complex subunit RsxD Morganella morganii S3
4 group_928 HKOGLL_11365 165891 166985 -1 rsxD electron transport complex subunit RsxD Morganella morganii S5
5 group_928 F4V73_RS05480 1165924 1167018 1 rsxD electron transport complex subunit RsxD Morganella psychrotolerans
6 group_928 PMI_RS06305 1382721 1383797 1 rsxD electron transport complex subunit RsxD Proteus mirabilis HI4320