COG4106


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG4106, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Trans-aconitate methyltransferase
Function(s) descr. Energy production and conversion (C)

Occurence in the database

COG4106 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_629 FBDBKF_02030 95179 95943 -1 cmoA carboxy-S-adenosyl-L-methionine synthase CmoA Morganella morganii S1
1 group_629 EHELCC_02500 482999 483763 -1 cmoA carboxy-S-adenosyl-L-methionine synthase CmoA Morganella morganii S2
2 group_629 NLDBIP_00960 196373 197137 1 cmoA carboxy-S-adenosyl-L-methionine synthase CmoA Morganella morganii S4
3 group_629 LHKJJB_01075 195548 196312 -1 cmoA carboxy-S-adenosyl-L-methionine synthase CmoA Morganella morganii S3
4 group_629 HKOGLL_01115 201059 201823 -1 cmoA carboxy-S-adenosyl-L-methionine synthase CmoA Morganella morganii S5
5 group_629 F4V73_RS04395 930810 931565 -1 cmoA carboxy-S-adenosyl-L-methionine synthase CmoA Morganella psychrotolerans
6 group_629 PMI_RS05380 1178163 1178912 -1 cmoA carboxy-S-adenosyl-L-methionine synthase CmoA Proteus mirabilis HI4320