Orthogroup:group_3652



Homologs in group_3652

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4 homologs were identified in 3 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_05545 FBDBKF_05545 Morganella morganii S1 hipB Transcriptional regulator, contains XRE-family HTH domain
FBDBKF_19670 FBDBKF_19670 Morganella morganii S1 - XRE family transcriptional regulator
NLDBIP_12385 NLDBIP_12385 Morganella morganii S4 hipB Transcriptional regulator, contains XRE-family HTH domain
LHKJJB_12245 LHKJJB_12245 Morganella morganii S3 hipB Transcriptional regulator, contains XRE-family HTH domain

Distribution of group_3652 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_3652 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3652

Orthogroup content: 4 members

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This page summarizes the annotation of all members of the orthologous group group_3652.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 hipB 3
2 - 1

Product

# Product Occurence
1 Transcriptional regulator, contains XRE-family HTH domain 3
2 XRE family transcriptional regulator 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1396 4 K Transcription (K) Transcriptional regulator, contains XRE-family HTH domain

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01381 4 Helix-turn-helix

Annotations of the 3 SwissProt hits

Annotation Number of occurrences
Antitoxin PezA 1
Uncharacterized HTH-type transcriptional regulator RC0668 1
Uncharacterized HTH-type transcriptional regulator RP497 1

Protein length

Min length 109
Max length 125
Mean length (sd) 121.0 (8.0)
Median length 125.0

Protein length distribution