COG2864


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG2864, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 13 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Cytochrome b subunit of formate dehydrogenase
Function(s) descr. Energy production and conversion (C)

Occurence in the database

COG2864 is associated with 13 different proteins (see tab "Protein list" and "Profile")
The 13 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_70 FBDBKF_08050 146285 146941 -1 fdnI formate dehydrogenase-N subunit gamma Morganella morganii S1
1 group_70 FBDBKF_16130 16659 17309 1 fdoI formate dehydrogenase cytochrome b556 subunit Morganella morganii S1
2 group_70 EHELCC_13880 120479 121135 -1 fdnI formate dehydrogenase-N subunit gamma Morganella morganii S2
3 group_70 EHELCC_16165 16659 17309 1 fdoI formate dehydrogenase cytochrome b556 subunit Morganella morganii S2
4 group_70 NLDBIP_14325 141354 142010 -1 fdnI formate dehydrogenase-N subunit gamma Morganella morganii S4
5 group_70 NLDBIP_17175 44861 45511 -1 fdoI formate dehydrogenase cytochrome b556 subunit Morganella morganii S4
6 group_70 LHKJJB_08525 17739 18395 1 fdnI formate dehydrogenase-N subunit gamma Morganella morganii S3
7 group_70 LHKJJB_17095 47963 48613 -1 fdoI formate dehydrogenase cytochrome b556 subunit Morganella morganii S3
8 group_70 HKOGLL_08075 17739 18395 1 fdnI formate dehydrogenase-N subunit gamma Morganella morganii S5
9 group_70 HKOGLL_16745 16659 17309 1 fdoI formate dehydrogenase cytochrome b556 subunit Morganella morganii S5
10 group_70 F4V73_RS12945 198915 199574 1 fdnI formate dehydrogenase-N subunit gamma Morganella psychrotolerans
11 group_70 F4V73_RS17485 128891 129541 -1 fdoI formate dehydrogenase cytochrome b556 subunit Morganella psychrotolerans
12 group_70 PMI_RS15385 3418420 3419076 -1 fdoI formate dehydrogenase cytochrome b556 subunit Proteus mirabilis HI4320