COG2252


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG2252, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 26 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family
Function(s) descr. Nucleotide transport and metabolism (F)

Occurence in the database

COG2252 is associated with 26 different proteins (see tab "Protein list" and "Profile")
The 26 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_58 FBDBKF_00470 72085 73419 1 nCS2 Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family Morganella morganii S1
1 group_69 FBDBKF_07665 45520 46887 -1 nCS2 Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family Morganella morganii S1
2 group_58 FBDBKF_10820 132252 133586 1 nCS2 Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family Morganella morganii S1
3 group_69 FBDBKF_16995 28567 29913 -1 nCS2 Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family Morganella morganii S1
4 group_58 EHELCC_01075 235449 236783 -1 nCS2 Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family Morganella morganii S2
5 group_69 EHELCC_13495 19714 21081 -1 nCS2 Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family Morganella morganii S2
6 group_69 EHELCC_16595 38597 39943 1 nCS2 Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family Morganella morganii S2
7 group_58 EHELCC_19410 3038 4372 1 nCS2 Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family Morganella morganii S2
8 group_58 NLDBIP_02385 443353 444687 1 nCS2 Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family Morganella morganii S4
9 group_69 NLDBIP_13940 40589 41956 -1 nCS2 Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family Morganella morganii S4
10 group_58 NLDBIP_14985 132242 133576 1 nCS2 Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family Morganella morganii S4
11 group_69 NLDBIP_16805 38597 39943 1 nCS2 Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family Morganella morganii S4
12 group_58 LHKJJB_03900 50594 51928 1 nCS2 Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family Morganella morganii S3
13 group_69 LHKJJB_08910 117793 119160 1 nCS2 Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family Morganella morganii S3
14 group_58 LHKJJB_14360 8150 9484 -1 nCS2 Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family Morganella morganii S3
15 group_69 LHKJJB_16665 28567 29913 -1 nCS2 Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family Morganella morganii S3
16 group_58 HKOGLL_03145 235654 236988 -1 nCS2 Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family Morganella morganii S5
17 group_69 HKOGLL_08460 117793 119160 1 nCS2 Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family Morganella morganii S5
18 group_58 HKOGLL_12980 8150 9484 -1 nCS2 Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family Morganella morganii S5
19 group_69 HKOGLL_17630 28567 29913 -1 nCS2 Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family Morganella morganii S5
20 group_58 F4V73_RS06430 1341851 1343185 1 NCS2 family permease Morganella psychrotolerans
21 group_69 F4V73_RS13435 321693 323060 1 NCS2 family permease Morganella psychrotolerans
22 group_58 F4V73_RS14505 129812 131149 1 NCS2 family permease Morganella psychrotolerans
23 group_69 F4V73_RS18455 26877 28223 -1 NCS2 family permease Morganella psychrotolerans
24 group_58 PMI_RS14410 3197304 3198662 1 NCS2 family permease Proteus mirabilis HI4320
25 group_69 PMI_RS17515 3844515 3845861 1 NCS2 family permease Proteus mirabilis HI4320