Orthogroup:group_42


Homologs in group_42

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13 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_00470 FBDBKF_00470 Morganella morganii S1 nCS2 Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family
FBDBKF_10820 FBDBKF_10820 Morganella morganii S1 nCS2 Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family
EHELCC_01075 EHELCC_01075 Morganella morganii S2 nCS2 Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family
EHELCC_19410 EHELCC_19410 Morganella morganii S2 nCS2 Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family
NLDBIP_02385 NLDBIP_02385 Morganella morganii S4 nCS2 Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family
NLDBIP_14985 NLDBIP_14985 Morganella morganii S4 nCS2 Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family
LHKJJB_03900 LHKJJB_03900 Morganella morganii S3 nCS2 Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family
LHKJJB_14360 LHKJJB_14360 Morganella morganii S3 nCS2 Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family
HKOGLL_03145 HKOGLL_03145 Morganella morganii S5 nCS2 Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family
HKOGLL_12980 HKOGLL_12980 Morganella morganii S5 nCS2 Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family
F4V73_RS06430 F4V73_RS06430 Morganella psychrotolerans - NCS2 family permease
F4V73_RS14505 F4V73_RS14505 Morganella psychrotolerans - NCS2 family permease
PMI_RS14410 PMI_RS14410 Proteus mirabilis HI4320 - NCS2 family permease

Distribution of group_42 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_42 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_42

Orthogroup content: 13 members

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This page summarizes the annotation of all members of the orthologous group group_42.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 nCS2 10
2 - 3

Product

# Product Occurence
1 Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family 10
2 NCS2 family permease 3

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2252 13 F Nucleotide transport and metabolism (F) Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K06901 13 adenine/guanine/hypoxanthine permease - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00860 13 Permease family

Annotations of the 15 SwissProt hits

Annotation Number of occurrences
Adenine permease AdeP 1
Adenine permease AdeQ 1
Adenine/guanine permease AZG1 1
Adenine/guanine permease AZG2 1
Efflux pump notK' 1
Guanine/hypoxanthine permease GhxP 2
Guanine/hypoxanthine permease GhxQ 1
Guanine/hypoxanthine permease PbuG 1
Guanine/hypoxanthine permease PbuO 1
Nucleobase transporter PlAzg1 1
Nucleobase transporter PlAzg2 1
Putative permease HI_0125 1
Putative permease MJ0326 1
Putative xanthine/uracil permease C887.17 1

Protein length

Min length 444
Max length 452
Mean length (sd) 444.7 (2.2)
Median length 444.0

Protein length distribution