Orthogroup:group_42


Homologs in group_42

Help

14 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_02805 FBDBKF_02805 Morganella morganii S1 phzF putative epimerase YddE/YHI9, PhzF superfamily
FBDBKF_02810 FBDBKF_02810 Morganella morganii S1 phzF putative epimerase YddE/YHI9, PhzF superfamily
EHELCC_03275 EHELCC_03275 Morganella morganii S2 phzF putative epimerase YddE/YHI9, PhzF superfamily
EHELCC_03280 EHELCC_03280 Morganella morganii S2 phzF putative epimerase YddE/YHI9, PhzF superfamily
NLDBIP_00180 NLDBIP_00180 Morganella morganii S4 phzF putative epimerase YddE/YHI9, PhzF superfamily
NLDBIP_00185 NLDBIP_00185 Morganella morganii S4 phzF putative epimerase YddE/YHI9, PhzF superfamily
LHKJJB_01850 LHKJJB_01850 Morganella morganii S3 phzF putative epimerase YddE/YHI9, PhzF superfamily
LHKJJB_01855 LHKJJB_01855 Morganella morganii S3 phzF putative epimerase YddE/YHI9, PhzF superfamily
HKOGLL_01890 HKOGLL_01890 Morganella morganii S5 phzF putative epimerase YddE/YHI9, PhzF superfamily
HKOGLL_01895 HKOGLL_01895 Morganella morganii S5 phzF putative epimerase YddE/YHI9, PhzF superfamily
F4V73_RS05255 F4V73_RS05255 Morganella psychrotolerans - PhzF family phenazine biosynthesis protein
F4V73_RS13370 F4V73_RS13370 Morganella psychrotolerans - PhzF family isomerase
PMI_RS08270 PMI_RS08270 Proteus mirabilis HI4320 - PhzF family phenazine biosynthesis protein
PMI_RS10595 PMI_RS10595 Proteus mirabilis HI4320 - PhzF family phenazine biosynthesis protein

Distribution of group_42 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_42 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_42

Orthogroup content: 14 members

Help

This page summarizes the annotation of all members of the orthologous group group_42.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 phzF 10
2 - 4

Product

# Product Occurence
1 putative epimerase YddE/YHI9, PhzF superfamily 10
2 PhzF family phenazine biosynthesis protein 3
3 PhzF family isomerase 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0384 14 R General function prediction only (R) Predicted epimerase YddE/YHI9, PhzF superfamily

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K06998 14 trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17] Phenazine biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
Quorum sensing		 Pyocyanine biosynthesis, chorismate => pyocyanine

Pfam domain Annotation(s)

Domain ID Occurences Description
PF02567 14 Phenazine biosynthesis-like protein

Annotations of the 30 SwissProt hits

Annotation Number of occurrences
Antisense-enhancing sequence 1 1
Phenazine biosynthesis-like domain-containing protein 4
Phenazine biosynthesis-like domain-containing protein 1 1
Phenazine biosynthesis-like domain-containing protein 2 1
Trans-2,3-dihydro-3-hydroxyanthranilate isomerase 3
Uncharacterized isomerase BH0283 1
Uncharacterized isomerase BH1950 1
Uncharacterized isomerase C186.06 1
Uncharacterized isomerase CA_C3446 1
Uncharacterized isomerase CC_3221 1
Uncharacterized isomerase DR_1330 1
Uncharacterized isomerase PA2770 1
Uncharacterized isomerase PA3578 1
Uncharacterized isomerase PM1503 1
Uncharacterized isomerase VC_A0395 1
Uncharacterized isomerase YHI9 1
Uncharacterized isomerase YddE 3
Uncharacterized isomerase YfhB 1
Uncharacterized isomerase mll1393 1
Uncharacterized isomerase slr1019 1
Uncharacterized protein MT2789 1
Uncharacterized protein Mb2735 1
Uncharacterized protein Rv2716 1

Protein length

Min length 259
Max length 297
Mean length (sd) 282.6 (8.7)
Median length 282.5

Protein length distribution