COG2230


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG2230, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases
Function(s) descr. Lipid transport and metabolism (I)

Occurence in the database

COG2230 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 3 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_277 FBDBKF_05765 156184 157347 1 cfa cyclopropane fatty acyl phospholipid synthase Morganella morganii S1
1 group_3504 FBDBKF_17345 44630 46267 1 gcd14 tRNA A58 N-methylase Trm61 Morganella morganii S1
2 group_3504 EHELCC_01545 309234 310871 -1 gcd14 tRNA A58 N-methylase Trm61 Morganella morganii S2
3 group_277 EHELCC_11825 24147 25310 -1 cfa cyclopropane fatty acyl phospholipid synthase Morganella morganii S2
4 group_3504 NLDBIP_01915 369265 370902 1 gcd14 tRNA A58 N-methylase Trm61 Morganella morganii S4
5 group_277 NLDBIP_12165 24102 25265 -1 cfa cyclopropane fatty acyl phospholipid synthase Morganella morganii S4
6 group_3504 LHKJJB_00120 21783 23420 -1 gcd14 tRNA A58 N-methylase Trm61 Morganella morganii S3
7 group_277 LHKJJB_12025 24147 25310 -1 cfa cyclopropane fatty acyl phospholipid synthase Morganella morganii S3
8 group_3504 HKOGLL_00160 27294 28931 -1 gcd14 tRNA A58 N-methylase Trm61 Morganella morganii S5
9 group_277 HKOGLL_10640 24147 25310 -1 cfa cyclopropane fatty acyl phospholipid synthase Morganella morganii S5
10 group_277 F4V73_RS03560 760312 761475 -1 cfa cyclopropane fatty acyl phospholipid synthase Morganella psychrotolerans
11 group_2524 F4V73_RS04655 981947 982717 -1 class I SAM-dependent methyltransferase Morganella psychrotolerans
12 group_277 F4V73_RS12520 95580 96719 1 cfa cyclopropane fatty acyl phospholipid synthase Morganella psychrotolerans
13 group_277 PMI_RS06770 1478049 1479203 1 cfa cyclopropane fatty acyl phospholipid synthase Proteus mirabilis HI4320