COG2062


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG2062, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 8 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Phosphohistidine phosphatase SixA
Function(s) descr. Signal transduction mechanisms (T)

Occurence in the database

COG2062 is associated with 8 different proteins (see tab "Protein list" and "Profile")
The 8 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1930 FBDBKF_14355 70566 70937 -1 sixA Phosphohistidine phosphatase SixA Morganella morganii S1
1 group_1930 EHELCC_07925 46048 46419 1 sixA Phosphohistidine phosphatase SixA Morganella morganii S2
2 group_1930 NLDBIP_08250 46048 46419 1 sixA Phosphohistidine phosphatase SixA Morganella morganii S4
3 group_1930 LHKJJB_06015 210740 211111 -1 sixA Phosphohistidine phosphatase SixA Morganella morganii S3
4 group_1930 HKOGLL_04900 30639 31010 1 sixA Phosphohistidine phosphatase SixA Morganella morganii S5
5 group_2335 F4V73_RS01845 402919 403491 1 histidine phosphatase family protein Morganella psychrotolerans
6 group_1930 F4V73_RS02550 539552 540019 1 sixA phosphohistidine phosphatase SixA Morganella psychrotolerans
7 group_1930 PMI_RS08855 1935724 1936209 -1 sixA phosphohistidine phosphatase SixA Proteus mirabilis HI4320