COG1830


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1830, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 13 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Fructose-bisphosphate aldolase class Ia, DhnA family
Function(s) descr. Carbohydrate transport and metabolism (G)

Occurence in the database

COG1830 is associated with 13 different proteins (see tab "Protein list" and "Profile")
The 13 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2516 FBDBKF_02170 122807 123688 -1 lsrF 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase Morganella morganii S1
1 group_2184 FBDBKF_16445 12702 13751 -1 fbaB class I fructose-bisphosphate aldolase Morganella morganii S1
2 group_2516 EHELCC_02640 510627 511508 -1 lsrF 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase Morganella morganii S2
3 group_2184 EHELCC_08310 129688 130737 -1 fbaB class I fructose-bisphosphate aldolase Morganella morganii S2
4 group_2516 NLDBIP_00820 168628 169509 1 lsrF 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase Morganella morganii S4
5 group_2184 NLDBIP_08635 129688 130737 -1 fbaB class I fructose-bisphosphate aldolase Morganella morganii S4
6 group_2516 LHKJJB_01215 223176 224057 -1 lsrF 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase Morganella morganii S3
7 group_2184 LHKJJB_05630 126422 127471 1 fbaB class I fructose-bisphosphate aldolase Morganella morganii S3
8 group_2516 HKOGLL_01255 228687 229568 -1 lsrF 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase Morganella morganii S5
9 group_2184 HKOGLL_05285 114279 115328 -1 fbaB class I fructose-bisphosphate aldolase Morganella morganii S5
10 group_2184 F4V73_RS02965 628251 629300 -1 fbaB class I fructose-bisphosphate aldolase Morganella psychrotolerans
11 group_2516 F4V73_RS04540 959507 960388 -1 lsrF 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase Morganella psychrotolerans
12 group_2184 PMI_RS07765 1700586 1701635 1 fbaB class I fructose-bisphosphate aldolase Proteus mirabilis HI4320