Orthogroup:group_2220


Homologs in group_2220

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_16975 FBDBKF_16975 Morganella morganii S1 metE 5-methyltetrahydropteroyltriglutamate--homocystei ne S-methyltransferase
EHELCC_16615 EHELCC_16615 Morganella morganii S2 metE 5-methyltetrahydropteroyltriglutamate--homocystei ne S-methyltransferase
NLDBIP_16825 NLDBIP_16825 Morganella morganii S4 metE 5-methyltetrahydropteroyltriglutamate--homocystei ne S-methyltransferase
LHKJJB_16645 LHKJJB_16645 Morganella morganii S3 metE 5-methyltetrahydropteroyltriglutamate--homocystei ne S-methyltransferase
HKOGLL_17610 HKOGLL_17610 Morganella morganii S5 metE 5-methyltetrahydropteroyltriglutamate--homocystei ne S-methyltransferase
F4V73_RS18435 F4V73_RS18435 Morganella psychrotolerans metE 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase
PMI_RS17540 PMI_RS17540 Proteus mirabilis HI4320 metE 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase

Distribution of group_2220 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2220 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2220

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2220.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 metE 7

Product

# Product Occurence
1 5-methyltetrahydropteroyltriglutamate--homocystei ne S-methyltransferase 5
2 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0620 7 E Amino acid transport and metabolism (E) Methionine synthase II (cobalamin-independent)

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01717 7 Cobalamin-independent synthase, Catalytic domain
PF08267 7 Cobalamin-independent synthase, N-terminal domain

Annotations of the 295 SwissProt hits

Annotation Number of occurrences
2-hydroxypropyl-CoM lyase 1
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 268
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (Fragment) 1
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1 2
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 2 2
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 3, chloroplastic 1
Methionine synthase 19
Probable 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1

Protein length

Min length 757
Max length 761
Mean length (sd) 760.3 (1.5)
Median length 761.0

Protein length distribution