Homologs in group_2516

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_02170 FBDBKF_02170 100.0 Morganella morganii S1 lsrF 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase
EHELCC_02640 EHELCC_02640 100.0 Morganella morganii S2 lsrF 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase
LHKJJB_01215 LHKJJB_01215 100.0 Morganella morganii S3 lsrF 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase
HKOGLL_01255 HKOGLL_01255 100.0 Morganella morganii S5 lsrF 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase
F4V73_RS04540 F4V73_RS04540 95.9 Morganella psychrotolerans lsrF 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase

Distribution of the homologs in the orthogroup group_2516

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2516

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q7N2D6 0.0 521 83 0 291 3 lsrF 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
Q8ZKQ0 0.0 516 83 0 291 2 lsrF 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q57HD9 0.0 516 83 0 291 3 lsrF 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase Salmonella choleraesuis (strain SC-B67)
Q8Z2X9 0.0 516 83 0 290 3 lsrF 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase Salmonella typhi
Q5PJE3 0.0 515 83 0 290 3 lsrF 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase Salmonella paratyphi A (strain ATCC 9150 / SARB42)
A9MZG5 0.0 512 83 0 290 3 lsrF 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
P76143 0.0 509 82 0 291 1 lsrF 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase Escherichia coli (strain K12)
B1XEA5 0.0 509 82 0 291 3 lsrF 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase Escherichia coli (strain K12 / DH10B)
Q8XAZ1 0.0 509 82 0 291 3 lsrF 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase Escherichia coli O157:H7
B1JLQ4 0.0 507 81 0 291 3 lsrF 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Q66EZ3 0.0 507 81 0 291 3 lsrF 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase Yersinia pseudotuberculosis serotype I (strain IP32953)
B2K3F7 0.0 507 81 0 291 3 lsrF 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase Yersinia pseudotuberculosis serotype IB (strain PB1/+)
A7FMK1 0.0 507 81 0 291 3 lsrF 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
B1IRU3 0.0 507 82 0 291 3 lsrF 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
A8A070 0.0 507 82 0 291 3 lsrF 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase Escherichia coli O9:H4 (strain HS)
A7ZLX4 0.0 507 82 0 291 3 lsrF 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase Escherichia coli O139:H28 (strain E24377A / ETEC)
A4TQL9 0.0 506 81 0 291 3 lsrF 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase Yersinia pestis (strain Pestoides F)
Q1CN19 0.0 506 81 0 291 3 lsrF 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase Yersinia pestis bv. Antiqua (strain Nepal516)
A9R0S6 0.0 506 81 0 291 3 lsrF 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase Yersinia pestis bv. Antiqua (strain Angola)
Q7CG47 0.0 506 81 0 291 3 lsrF 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase Yersinia pestis
Q1C134 0.0 506 81 0 291 3 lsrF 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase Yersinia pestis bv. Antiqua (strain Antiqua)
A1JJ51 0.0 506 81 0 290 3 lsrF 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
B1LF98 0.0 503 81 0 291 3 lsrF 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase Escherichia coli (strain SMS-3-5 / SECEC)
Q9CLF7 2.92e-180 501 80 0 290 3 PM1278 Uncharacterized aldolase PM1278 Pasteurella multocida (strain Pm70)
A6TEB4 7.07e-179 498 79 0 291 3 lsrF 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
A4WER0 3.91e-177 493 79 0 291 3 lsrF 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase Enterobacter sp. (strain 638)
Q83L15 9.12e-159 445 82 0 256 3 lsrF 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase Shigella flexneri
Q0T4L4 1.78e-158 444 82 0 256 3 lsrF 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase Shigella flexneri serotype 5b (strain 8401)
O30128 1.17e-35 132 30 5 261 3 AF_0108 Putative 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase 2 Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)
O67506 2.12e-32 123 31 6 260 3 aroA' 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase Aquifex aeolicus (strain VF5)
A6UTT2 4.18e-32 122 29 4 255 3 aroA' 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase Methanococcus aeolicus (strain ATCC BAA-1280 / DSM 17508 / OCM 812 / Nankai-3)
Q57843 9.62e-32 122 29 5 258 1 aroA' 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
A4FYB3 1.02e-28 114 28 5 254 3 aroA' 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase Methanococcus maripaludis (strain C5 / ATCC BAA-1333)
A9A799 1.38e-28 113 29 5 244 3 aroA' 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase Methanococcus maripaludis (strain C6 / ATCC BAA-1332)
A6VJZ0 1.42e-28 113 29 5 244 3 aroA' 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase Methanococcus maripaludis (strain C7 / ATCC BAA-1331)
O26679 3.54e-28 112 28 6 252 3 aroA' 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
Q6LZE3 8.98e-28 111 29 5 244 3 aroA' 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase Methanococcus maripaludis (strain DSM 14266 / JCM 13030 / NBRC 101832 / S2 / LL)
A6USC8 1.43e-27 110 29 5 244 3 aroA' 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase Methanococcus vannielii (strain ATCC 35089 / DSM 1224 / JCM 13029 / OCM 148 / SB)
Q9HSB8 7.76e-26 106 30 5 248 3 aroA' 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)
Q9V2I6 1e-25 106 29 9 264 3 fba Fructose-bisphosphate aldolase class 1 Pyrococcus abyssi (strain GE5 / Orsay)
O30009 1.25e-24 102 29 4 243 3 aroA' 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase 1 Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)
O57840 1.78e-24 102 27 8 265 3 fba Fructose-bisphosphate aldolase class 1 Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
P58314 2.55e-24 102 28 9 266 1 fba Fructose-bisphosphate aldolase class 1 Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
Q9YG90 3.5e-24 102 31 11 271 3 fba Probable fructose-bisphosphate aldolase class 1 Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
Q8J308 7.83e-24 101 28 8 265 1 fba Fructose-bisphosphate aldolase class 1 Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
A0JC77 4.86e-16 79 27 5 244 1 griI 2-amino-4,5-dihydroxy-6-oxo-7-(phosphonooxy)heptanoate synthase Streptomyces griseus
B1VTI8 4.86e-16 79 27 5 244 3 griI 2-amino-4,5-dihydroxy-6-oxo-7-(phosphonooxy)heptanoate synthase Streptomyces griseus subsp. griseus (strain JCM 4626 / CBS 651.72 / NBRC 13350 / KCC S-0626 / ISP 5235)
Q9HRI2 8.7e-16 78 25 5 242 3 VNG_0683C Fructose-bisphosphate aldolase class 1 Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)
B0R3Y0 8.7e-16 78 25 5 242 1 fba1 Fructose-bisphosphate aldolase class 1 Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1)
Q97U03 2.43e-13 72 25 10 271 3 SSO3226 Uncharacterized aldolase SSO3226 Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
P58315 4.24e-13 71 24 11 263 1 fba Fructose-bisphosphate aldolase class 1 Thermoproteus tenax (strain ATCC 35583 / DSM 2078 / JCM 9277 / NBRC 100435 / Kra 1)

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_00820
Feature type CDS
Gene lsrF
Product 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase
Location 168628 - 169509 (strand: 1)
Length 882 (nucleotides) / 293 (amino acids)

Contig

Accession ZDB_519
Length 680340 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2516
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF01791 DeoC/LacD family aldolase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1830 Carbohydrate transport and metabolism (G) G Fructose-bisphosphate aldolase class Ia, DhnA family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K08321 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase [EC:2.3.1.245] Quorum sensing -

Protein Sequence

MADLDDIRDGKDFGLNTPQKNTLYTLKGCGSLDWGMQSRLARIFNPQDNKTVMLAFDHGYFQGPTTGLERIDINIAPLFEHTDVLMCTRGILRAQVPVTTNKPVVLRASGANSILTELSNEAVAVAMDDAVRLNVAAVAAQVYIGTEHEHQSIKNIIKMVDAGMRVGMPVMAVTGVGKDMARDQRYFSLASRIAAEMGANIIKTYFVEEGFERITAGCPVPIVIAGGKKLPENEALDMCFRAIDQGASGVDMGRNIFQSENPVAMMKAVRAVVHGGESAAQAYQLFLSEKNKG

Flanking regions ( +/- flanking 50bp)

AACCAATGGCGCGGGCACCCTCCGCGCCAGTTTAACCAGGGGAGAATTCCATGGCTGATTTAGATGATATCCGTGACGGCAAAGACTTCGGGCTTAATACGCCGCAAAAAAACACCCTTTATACCCTCAAAGGCTGCGGTTCGCTGGATTGGGGTATGCAGTCGCGTCTGGCCCGTATTTTTAATCCGCAGGATAATAAAACGGTCATGCTGGCCTTTGACCACGGCTATTTCCAGGGGCCGACCACCGGCCTTGAGCGGATTGATATTAATATCGCCCCGCTTTTTGAGCATACCGATGTCCTGATGTGTACCCGCGGGATCCTGCGTGCACAGGTGCCGGTCACGACCAACAAACCGGTGGTGCTGCGGGCATCCGGCGCTAACTCCATCCTGACCGAACTCTCCAACGAAGCGGTTGCGGTGGCAATGGATGATGCGGTACGCCTGAATGTGGCGGCTGTTGCGGCTCAGGTCTATATCGGTACTGAGCATGAACACCAGTCCATCAAAAACATCATCAAAATGGTGGATGCGGGGATGCGTGTCGGTATGCCGGTAATGGCAGTGACCGGGGTGGGTAAAGATATGGCGCGTGATCAGCGTTATTTCTCACTCGCCAGCCGTATTGCTGCAGAAATGGGCGCTAATATCATCAAAACCTACTTTGTTGAGGAAGGTTTTGAGCGCATCACCGCCGGTTGTCCGGTACCGATTGTCATTGCGGGCGGTAAAAAACTGCCGGAAAACGAAGCTCTCGACATGTGTTTCCGCGCCATTGACCAGGGCGCATCCGGGGTGGATATGGGCCGGAATATTTTCCAGTCCGAAAACCCGGTTGCCATGATGAAAGCGGTCCGTGCCGTTGTGCATGGCGGTGAGAGTGCCGCACAGGCTTATCAGCTGTTCCTGAGCGAAAAGAACAAGGGGTAAATTTTGAACGTAACATTAGTGGAAATTAATGTGAAACCCGGCAAAGTGGA