COG1826


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1826, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Twin-arginine protein secretion pathway components TatA and TatB
Function(s) descr. Intracellular trafficking, secretion, and vesicular transport (U)

Occurence in the database

COG1826 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2213 FBDBKF_16920 12449 12979 -1 tatB Sec-independent protein translocase protein TatB Morganella morganii S1
1 group_2214 FBDBKF_16925 12983 13243 -1 tatA Sec-independent protein translocase subunit TatA Morganella morganii S1
2 group_2214 EHELCC_16665 55267 55527 1 tatA Sec-independent protein translocase subunit TatA Morganella morganii S2
3 group_2213 EHELCC_16670 55531 56061 1 tatB Sec-independent protein translocase protein TatB Morganella morganii S2
4 group_2214 NLDBIP_16875 55267 55527 1 tatA Sec-independent protein translocase subunit TatA Morganella morganii S4
5 group_2213 NLDBIP_16880 55531 56061 1 tatB Sec-independent protein translocase protein TatB Morganella morganii S4
6 group_2213 LHKJJB_16590 12449 12979 -1 tatB Sec-independent protein translocase protein TatB Morganella morganii S3
7 group_2214 LHKJJB_16595 12983 13243 -1 tatA Sec-independent protein translocase subunit TatA Morganella morganii S3
8 group_2213 HKOGLL_17555 12449 12979 -1 tatB Sec-independent protein translocase protein TatB Morganella morganii S5
9 group_2214 HKOGLL_17560 12983 13243 -1 tatA Sec-independent protein translocase subunit TatA Morganella morganii S5
10 group_2213 F4V73_RS18390 12572 13108 -1 tatB Sec-independent protein translocase protein TatB Morganella psychrotolerans
11 group_2214 F4V73_RS18395 13112 13390 -1 tatA Sec-independent protein translocase subunit TatA Morganella psychrotolerans
12 group_2214 PMI_RS17590 3861437 3861703 1 tatA Sec-independent protein translocase subunit TatA Proteus mirabilis HI4320
13 group_2213 PMI_RS17595 3861707 3862237 1 tatB Sec-independent protein translocase protein TatB Proteus mirabilis HI4320