COG1738


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1738, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Queuosine precursor transporter YhhQ, DUF165 family
Function(s) descr. Translation, ribosomal structure and biogenesis (J)

Occurence in the database

COG1738 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_774 FBDBKF_03570 118141 118809 1 yhhQ 7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguani ne transporter Morganella morganii S1
1 group_774 EHELCC_06965 128294 128962 -1 yhhQ 7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguani ne transporter Morganella morganii S2
2 group_774 NLDBIP_07290 128167 128835 -1 yhhQ 7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguani ne transporter Morganella morganii S4
3 group_774 LHKJJB_06825 91913 92581 -1 yhhQ 7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguani ne transporter Morganella morganii S3
4 group_774 HKOGLL_04105 140806 141474 1 yhhQ 7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguani ne transporter Morganella morganii S5
5 group_774 F4V73_RS11325 407171 407839 -1 7-cyano-7-deazaguanine/7-aminomethyl-7- deazaguanine transporter Morganella psychrotolerans
6 group_774 PMI_RS17890 3931181 3931855 -1 7-cyano-7-deazaguanine/7-aminomethyl-7- deazaguanine transporter Proteus mirabilis HI4320