COG1669


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1669, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Predicted nucleotidyltransferase MJ0435
Function(s) descr. General function prediction only (R)

Occurence in the database

COG1669 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_284 FBDBKF_06290 89919 90683 1 Polymerase nucleotidyl transferase domain-containing protein Morganella morganii S1
1 group_284 EHELCC_09335 90491 91255 1 Polymerase nucleotidyl transferase domain-containing protein Morganella morganii S2
2 group_284 NLDBIP_09715 90491 91255 1 Polymerase nucleotidyl transferase domain-containing protein Morganella morganii S4
3 group_284 LHKJJB_08040 125983 126747 -1 Polymerase nucleotidyl transferase domain-containing protein Morganella morganii S3
4 group_284 HKOGLL_07590 125983 126747 -1 Polymerase nucleotidyl transferase domain-containing protein Morganella morganii S5
5 group_284 PMI_RS19645 2062726 2063010 -1 nucleotidyltransferase domain-containing protein Proteus mirabilis HI4320