Homologs in group_48

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13 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_07250 FBDBKF_07250 42.2 Morganella morganii S1 tyrB Aspartate/aromatic aminotransferase
FBDBKF_17040 FBDBKF_17040 89.9 Morganella morganii S1 tyrB Aspartate/aromatic aminotransferase
EHELCC_03720 EHELCC_03720 42.2 Morganella morganii S2 tyrB Aspartate/aromatic aminotransferase
EHELCC_16550 EHELCC_16550 89.9 Morganella morganii S2 tyrB Aspartate/aromatic aminotransferase
NLDBIP_03720 NLDBIP_03720 42.2 Morganella morganii S4 tyrB Aspartate/aromatic aminotransferase
NLDBIP_16760 NLDBIP_16760 89.9 Morganella morganii S4 tyrB Aspartate/aromatic aminotransferase
LHKJJB_09550 LHKJJB_09550 42.2 Morganella morganii S3 tyrB Aspartate/aromatic aminotransferase
LHKJJB_16710 LHKJJB_16710 89.9 Morganella morganii S3 tyrB Aspartate/aromatic aminotransferase
HKOGLL_09425 HKOGLL_09425 42.2 Morganella morganii S5 tyrB Aspartate/aromatic aminotransferase
HKOGLL_17675 HKOGLL_17675 89.9 Morganella morganii S5 tyrB Aspartate/aromatic aminotransferase
F4V73_RS01435 F4V73_RS01435 41.7 Morganella psychrotolerans - amino acid aminotransferase
PMI_RS03755 PMI_RS03755 40.4 Proteus mirabilis HI4320 - amino acid aminotransferase
PMI_RS13520 PMI_RS13520 64.7 Proteus mirabilis HI4320 - amino acid aminotransferase

Distribution of the homologs in the orthogroup group_48

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_48

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P04693 0.0 569 67 0 396 1 tyrB Aromatic-amino-acid aminotransferase Escherichia coli (strain K12)
P74861 0.0 556 64 0 396 3 tyrB Aromatic-amino-acid aminotransferase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
O85746 0.0 541 63 0 396 1 tyrB Tyrosine aminotransferase Klebsiella pneumoniae
P72173 6.52e-125 369 47 1 396 3 aspC Aspartate aminotransferase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P44425 3.42e-116 347 40 1 396 3 aspC Aspartate aminotransferase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q56114 2.53e-109 329 39 1 396 3 aspC Aspartate aminotransferase Salmonella typhi
P58661 4.64e-109 328 39 1 396 3 aspC Aspartate aminotransferase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P43336 4.78e-109 328 43 2 395 3 phhC Aromatic-amino-acid aminotransferase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P00509 6.78e-109 328 39 1 396 1 aspC Aspartate aminotransferase Escherichia coli (strain K12)
P00508 5.14e-108 327 42 3 399 1 GOT2 Aspartate aminotransferase, mitochondrial Gallus gallus
P00505 3.61e-106 322 41 3 399 1 GOT2 Aspartate aminotransferase, mitochondrial Homo sapiens
P05202 7.62e-106 322 41 3 399 1 Got2 Aspartate aminotransferase, mitochondrial Mus musculus
P00506 7.7e-106 322 41 3 397 1 GOT2 Aspartate aminotransferase, mitochondrial Sus scrofa
P12344 1.05e-105 321 42 3 397 1 GOT2 Aspartate aminotransferase, mitochondrial Bos taurus
Q7SYK7 1.46e-105 321 41 3 390 2 got2a Aspartate aminotransferase, mitochondrial Danio rerio
P00507 1.48e-105 321 42 4 402 1 Got2 Aspartate aminotransferase, mitochondrial Rattus norvegicus
Q4R559 1.83e-105 320 41 3 399 2 GOT2 Aspartate aminotransferase, mitochondrial Macaca fascicularis
P12345 2.2e-105 320 42 3 397 1 GOT2 Aspartate aminotransferase, mitochondrial Oryctolagus cuniculus
Q5REB0 2.35e-105 320 41 3 399 2 GOT2 Aspartate aminotransferase, mitochondrial Pongo abelii
Q4R5L1 3.97e-103 314 42 3 387 2 GOT1 Aspartate aminotransferase, cytoplasmic Macaca fascicularis
P08907 4.21e-103 313 40 3 399 1 GOT2 Aspartate aminotransferase, mitochondrial Equus caballus
P00503 1.77e-102 312 42 5 388 1 GOT1 Aspartate aminotransferase, cytoplasmic Sus scrofa
Q55F21 2.22e-102 312 40 2 389 3 aatA Aspartate aminotransferase, mitochondrial Dictyostelium discoideum
P08906 2.42e-102 312 41 3 387 1 GOT1 Aspartate aminotransferase, cytoplasmic Equus caballus
P05201 4.74e-102 311 41 3 387 1 Got1 Aspartate aminotransferase, cytoplasmic Mus musculus
Q5R691 4.84e-102 311 41 3 387 2 GOT1 Aspartate aminotransferase, cytoplasmic Pongo abelii
A5A6K8 7.8e-102 311 41 3 387 2 GOT1 Aspartate aminotransferase, cytoplasmic Pan troglodytes
P17174 1.03e-101 310 41 3 387 1 GOT1 Aspartate aminotransferase, cytoplasmic Homo sapiens
Q28F67 1.54e-101 310 40 3 399 2 got2 Aspartate aminotransferase, mitochondrial Xenopus tropicalis
P13221 2.33e-101 309 41 3 387 1 Got1 Aspartate aminotransferase, cytoplasmic Rattus norvegicus
P46644 4.2e-101 310 38 1 397 1 ASP3 Aspartate aminotransferase 3, chloroplastic Arabidopsis thaliana
P28734 5.67e-101 308 38 1 396 2 None Aspartate aminotransferase, cytoplasmic Daucus carota
P33097 1.6e-100 307 42 5 388 1 GOT1 Aspartate aminotransferase, cytoplasmic Bos taurus
P46248 2.94e-100 308 39 3 394 1 ASP5 Aspartate aminotransferase, chloroplastic Arabidopsis thaliana
P37833 8.38e-100 305 37 2 390 2 Os01g0760600 Aspartate aminotransferase, cytoplasmic Oryza sativa subsp. japonica
P46645 1.64e-99 304 37 2 400 1 ASP2 Aspartate aminotransferase, cytoplasmic isozyme 1 Arabidopsis thaliana
Q54SF7 1.06e-98 303 39 4 395 3 aatB Aspartate aminotransferase, cytoplasmic Dictyostelium discoideum
P00504 4.66e-98 301 39 5 388 1 GOT1 Aspartate aminotransferase, cytoplasmic Gallus gallus
P26563 6.37e-97 299 37 3 394 2 None Aspartate aminotransferase P2, mitochondrial (Fragment) Lupinus angustifolius
O94320 3.96e-95 294 38 4 389 3 SPBC725.01 Aspartate aminotransferase, mitochondrial Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P46643 8.96e-95 293 39 3 400 1 ASP1 Aspartate aminotransferase, mitochondrial Arabidopsis thaliana
P28011 2.24e-94 291 36 1 397 2 AAT-1 Aspartate aminotransferase 1 Medicago sativa
P46646 3.76e-94 291 37 3 387 2 ASP4 Aspartate aminotransferase, cytoplasmic isozyme 2 Arabidopsis thaliana
P23542 9.38e-92 285 38 5 407 1 AAT2 Aspartate aminotransferase, cytoplasmic Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
P95468 4.21e-89 277 36 2 396 1 tyrB Aromatic-amino-acid aminotransferase Paracoccus denitrificans
Q22067 6.26e-89 277 40 4 374 1 got-1.2 Aspartate aminotransferase, cytoplasmic Caenorhabditis elegans
O42652 1.05e-84 266 35 2 401 1 aat2 Aspartate aminotransferase, cytoplasmic Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q02636 2.67e-83 262 35 5 397 3 tatA Tyrosine aminotransferase Rhizobium meliloti (strain 1021)
Q01802 8.38e-77 248 36 14 424 1 AAT1 Aspartate aminotransferase, mitochondrial Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
A0A0C1E1D0 1.83e-66 223 33 6 394 1 ucdG L-tyrosine:2-oxoglutarate aminotransferase ucdG Aspergillus ustus
A0A0F7CUE9 1.1e-57 194 34 5 332 3 tasG Aminotransferase tasG Hapsidospora irregularis
Q2T9S8 1.24e-50 178 29 5 381 2 GOT1L1 Putative aspartate aminotransferase, cytoplasmic 2 Bos taurus
Q8NHS2 2.36e-49 175 28 5 382 1 GOT1L1 Putative aspartate aminotransferase, cytoplasmic 2 Homo sapiens
Q7TSV6 2.67e-44 161 28 5 381 2 Got1l1 Putative aspartate aminotransferase, cytoplasmic 2 Mus musculus
Q795M6 1.11e-05 50 26 6 211 3 yugH Putative aminotransferase YugH Bacillus subtilis (strain 168)
Q4J8X2 1.35e-05 50 24 10 281 3 aspC Aspartate aminotransferase Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
Q9V0L2 2.75e-05 49 27 10 235 3 aspC Aspartate aminotransferase Pyrococcus abyssi (strain GE5 / Orsay)
P96847 3.31e-05 49 23 9 254 1 aspB Valine--pyruvate aminotransferase Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Q9HUI9 4.55e-05 48 25 12 270 1 aruH Arginine--pyruvate transaminase AruH Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q972A2 0.000244 46 24 13 301 3 aspC Aspartate aminotransferase Sulfurisphaera tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS18520
Feature type CDS
Gene -
Product amino acid aminotransferase
Location 40682 - 41878 (strand: -1)
Length 1197 (nucleotides) / 398 (amino acids)

Contig

Accession term accessions NZ_VXKB01000009 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 74461 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_48
Orthogroup size 14
N. genomes 7

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Genomic region

Domains

PF00155 Aminotransferase class I and II

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1448 Amino acid transport and metabolism (E) E Aspartate/aromatic aminotransferase

Kegg Ortholog Annotation(s)

Protein Sequence

MFEHVDAYGGDPILTLVEHFKQDPRKDKVNLSIGLYYDESGVTPQLNSIAQAKQRYIAQDSGASLYLPMEGLASYRSAIQALLLGDESPLIREGRVVTIQTLGGSGALKIGADFLHRYFPGSDVWLSDPTWENHQAIFAGAGFKTHYYPYFDPQTKGVKFDEMLATFETLPEKSIILLHPCCHNPTGSDLTPEQWDKVTSVVKKRGLIPFLDIAYQGFGAGIEEDAYAIRAMAAAGIPCFISNSFSKIFSLYGERVGGLSVLCPTQQEAECVLGQLKAGVRRVYSSAPSYGAKLVSEVLNDAALKAEWLTEVETMRRRIADMRTVLVETLKGTLPEKNFDHLLHQRGMFSYTGFSQAQVTALKEQHGVYLVGSGRVCMAGVNRHNVDVIAQAFAAVSR

Flanking regions ( +/- flanking 50bp)

CGACGCGATATGGTCTGAAGTGAGAAAAATAACTATCAGGAGTATCGCTTGTGTTTGAACATGTAGACGCCTATGGCGGCGACCCGATCTTAACGCTCGTCGAGCATTTTAAACAGGATCCCCGGAAAGATAAGGTCAATCTCAGTATTGGTCTGTATTACGATGAATCCGGGGTAACTCCGCAACTCAACAGCATTGCACAGGCGAAACAGCGCTATATCGCGCAGGACAGCGGCGCATCTCTTTATCTGCCGATGGAAGGGCTGGCGTCTTATCGCAGCGCTATTCAGGCTCTGCTTCTCGGTGATGAGAGTCCGCTTATCCGTGAAGGACGGGTAGTGACGATCCAAACCCTGGGCGGATCCGGCGCACTGAAGATCGGCGCTGATTTTCTGCATCGTTATTTTCCGGGATCGGATGTCTGGCTCAGTGATCCGACATGGGAAAACCATCAGGCGATCTTTGCCGGTGCCGGATTTAAAACCCATTATTACCCGTATTTTGATCCGCAGACCAAAGGTGTGAAATTTGATGAAATGCTGGCAACGTTTGAAACATTGCCGGAAAAAAGCATCATTTTACTGCATCCGTGCTGCCATAACCCGACCGGGTCTGATCTGACGCCTGAACAGTGGGATAAAGTCACAAGTGTCGTGAAAAAACGCGGGCTGATCCCTTTCCTGGACATTGCCTATCAGGGCTTCGGGGCAGGCATTGAAGAAGATGCATATGCTATCCGCGCCATGGCAGCCGCCGGTATCCCGTGCTTTATCAGTAACTCCTTCTCGAAAATTTTCTCCCTGTATGGCGAGCGCGTCGGCGGGCTGTCCGTTCTCTGCCCGACACAGCAGGAAGCTGAGTGTGTGCTGGGACAACTGAAAGCCGGTGTCCGCCGGGTCTACTCCAGCGCGCCGTCTTATGGTGCAAAACTGGTATCTGAAGTGCTGAATGATGCGGCACTGAAAGCGGAGTGGTTAACAGAAGTGGAAACTATGCGTCGCCGGATAGCCGATATGCGTACTGTGCTGGTGGAAACCCTGAAAGGGACATTGCCGGAGAAAAATTTTGATCATCTTCTGCATCAGCGCGGCATGTTCAGTTACACCGGGTTCAGTCAGGCGCAGGTTACCGCCCTGAAAGAGCAACACGGGGTTTACCTGGTCGGCTCTGGTCGCGTTTGTATGGCGGGGGTGAATCGTCATAATGTGGATGTGATCGCACAGGCATTTGCAGCGGTCAGCCGTTAATTCCGCACAAAAAATAGTTATGCGCGGTATAATACGGTTCCGCGCACTTT