COG1113


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1113, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 21 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description L-asparagine transporter or related permease
Function(s) descr. Amino acid transport and metabolism (E)

Occurence in the database

COG1113 is associated with 21 different proteins (see tab "Protein list" and "Profile")
The 21 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_7 FBDBKF_00495 78213 79610 1 cycA D-serine/D-alanine/glycine transporter Morganella morganii S1
1 group_7 FBDBKF_16420 7837 9243 1 ansP L-asparagine transporter or related permease Morganella morganii S1
2 group_7 FBDBKF_19025 21290 22651 1 proY L-asparagine transporter or related permease Morganella morganii S1
3 group_7 EHELCC_01050 229258 230655 -1 cycA D-serine/D-alanine/glycine transporter Morganella morganii S2
4 group_7 EHELCC_08285 124823 126229 1 ansP L-asparagine transporter or related permease Morganella morganii S2
5 group_7 EHELCC_18770 21290 22651 1 proY L-asparagine transporter or related permease Morganella morganii S2
6 group_7 NLDBIP_02410 449481 450878 1 cycA D-serine/D-alanine/glycine transporter Morganella morganii S4
7 group_7 NLDBIP_08610 124823 126229 1 ansP L-asparagine transporter or related permease Morganella morganii S4
8 group_7 NLDBIP_18535 2862 4223 -1 proY L-asparagine transporter or related permease Morganella morganii S4
9 group_7 LHKJJB_03925 56722 58119 1 cycA D-serine/D-alanine/glycine transporter Morganella morganii S3
10 group_7 LHKJJB_05655 130930 132336 -1 ansP L-asparagine transporter or related permease Morganella morganii S3
11 group_7 LHKJJB_18640 21290 22651 1 proY L-asparagine transporter or related permease Morganella morganii S3
12 group_7 HKOGLL_03120 229463 230860 -1 cycA D-serine/D-alanine/glycine transporter Morganella morganii S5
13 group_7 HKOGLL_05260 109414 110820 1 ansP L-asparagine transporter or related permease Morganella morganii S5
14 group_7 HKOGLL_18375 21290 22651 1 proY L-asparagine transporter or related permease Morganella morganii S5
15 group_7 F4V73_RS02940 623093 624493 1 amino acid permease Morganella psychrotolerans
16 group_7 F4V73_RS06505 1353653 1355050 1 cycA D-serine/D-alanine/glycine transporter Morganella psychrotolerans
17 group_7 F4V73_RS13930 421249 422685 1 amino acid permease Morganella psychrotolerans
18 group_7 PMI_RS07785 1704951 1706333 -1 amino acid permease Proteus mirabilis HI4320
19 group_7 PMI_RS07880 1723634 1725046 -1 cycA D-serine/D-alanine/glycine transporter Proteus mirabilis HI4320
20 group_7 PMI_RS11100 2443092 2444459 1 amino acid permease Proteus mirabilis HI4320