COG1028


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1028, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 49 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family
Function(s) descr. Lipid transport and metabolism (I)

Occurence in the database

COG1028 is associated with 49 different proteins (see tab "Protein list" and "Profile")
The 49 proteins are classified into 6 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2475 FBDBKF_00655 108295 109032 -1 fabG NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family Morganella morganii S1
1 group_877 FBDBKF_04490 92245 93024 -1 fabG NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family Morganella morganii S1
2 group_943 FBDBKF_05130 33571 34353 1 fabG YciK family oxidoreductase Morganella morganii S1
3 group_1674 FBDBKF_11635 122407 123159 1 fabG NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family Morganella morganii S1
4 group_341 FBDBKF_11735 133962 134717 -1 fabG 3-oxoacyl-ACP reductase FabG Morganella morganii S1
5 group_55 FBDBKF_14715 40774 41508 -1 fabG 3-oxoacyl-ACP reductase FabG Morganella morganii S1
6 group_2475 EHELCC_00890 199836 200573 1 fabG NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family Morganella morganii S2
7 group_877 EHELCC_05780 151702 152481 -1 fabG NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family Morganella morganii S2
8 group_943 EHELCC_12460 147141 147923 -1 fabG YciK family oxidoreductase Morganella morganii S2
9 group_55 EHELCC_15520 70850 71584 -1 fabG 3-oxoacyl-ACP reductase FabG Morganella morganii S2
10 group_1674 EHELCC_17555 20750 21502 1 fabG NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family Morganella morganii S2
11 group_341 EHELCC_17655 32305 33060 -1 fabG 3-oxoacyl-ACP reductase FabG Morganella morganii S2
12 group_2475 NLDBIP_02570 479563 480300 -1 fabG NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family Morganella morganii S4
13 group_877 NLDBIP_06100 192767 193546 -1 fabG NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family Morganella morganii S4
14 group_943 NLDBIP_12800 147096 147878 -1 fabG YciK family oxidoreductase Morganella morganii S4
15 group_55 NLDBIP_16050 70850 71584 -1 fabG 3-oxoacyl-ACP reductase FabG Morganella morganii S4
16 group_1674 NLDBIP_18765 21497 22249 1 fabG NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family Morganella morganii S4
17 group_341 NLDBIP_19325 8250 9005 -1 fabG 3-oxoacyl-ACP reductase FabG Morganella morganii S4
18 group_877 LHKJJB_02980 170291 171070 -1 fabG NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family Morganella morganii S3
19 group_2475 LHKJJB_04085 86804 87541 -1 fabG NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family Morganella morganii S3
20 group_943 LHKJJB_12660 147141 147923 -1 fabG YciK family oxidoreductase Morganella morganii S3
21 group_55 LHKJJB_15790 45102 45836 1 fabG 3-oxoacyl-ACP reductase FabG Morganella morganii S3
22 group_1674 LHKJJB_17995 20750 21502 1 fabG NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family Morganella morganii S3
23 group_341 LHKJJB_18095 32305 33060 -1 fabG 3-oxoacyl-ACP reductase FabG Morganella morganii S3
24 group_2475 HKOGLL_02960 200041 200778 1 fabG NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family Morganella morganii S5
25 group_877 HKOGLL_06455 92155 92934 -1 fabG NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family Morganella morganii S5
26 group_943 HKOGLL_11275 147141 147923 -1 fabG YciK family oxidoreductase Morganella morganii S5
27 group_55 HKOGLL_14910 44314 45048 1 fabG 3-oxoacyl-ACP reductase FabG Morganella morganii S5
28 group_1674 HKOGLL_18655 2729 3481 -1 fabG NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family Morganella morganii S5
29 group_341 HKOGLL_18985 8994 9749 1 fabG 3-oxoacyl-ACP reductase FabG Morganella morganii S5
30 group_55 F4V73_RS04350 919919 920629 -1 SDR family oxidoreductase Morganella psychrotolerans
31 group_341 F4V73_RS05015 1067874 1068737 -1 SDR family NAD(P)-dependent oxidoreductase Morganella psychrotolerans
32 group_943 F4V73_RS05585 1188616 1189398 1 YciK family oxidoreductase Morganella psychrotolerans
33 group_2475 F4V73_RS06665 1385131 1385868 -1 SDR family oxidoreductase Morganella psychrotolerans
34 group_55 F4V73_RS07510 1569496 1570230 -1 fabG 3-oxoacyl-ACP reductase FabG Morganella psychrotolerans
35 group_341 F4V73_RS07950 1657927 1658682 1 fabG 3-oxoacyl-ACP reductase FabG Morganella psychrotolerans
36 group_1674 F4V73_RS08045 1670476 1671228 -1 SDR family NAD(P)-dependent oxidoreductase Morganella psychrotolerans
37 group_877 F4V73_RS08945 1857269 1858048 -1 acetoin reductase Morganella psychrotolerans
38 group_55 F4V73_RS12010 555956 556696 1 3-ketoacyl-ACP reductase FabG2 Morganella psychrotolerans
39 group_55 PMI_RS04225 951173 951907 1 fabG 3-oxoacyl-ACP reductase FabG Proteus mirabilis HI4320
40 group_943 PMI_RS06450 1415895 1416656 1 YciK family oxidoreductase Proteus mirabilis HI4320
41 group_55 PMI_RS07455 1627347 1628135 1 glucose 1-dehydrogenase Proteus mirabilis HI4320
42 group_1674 PMI_RS08975 1956932 1957684 -1 SDR family NAD(P)-dependent oxidoreductase Proteus mirabilis HI4320
43 group_877 PMI_RS10305 2259253 2260032 -1 acetoin reductase Proteus mirabilis HI4320
44 group_55 PMI_RS10505 2312015 2312770 -1 kduD 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD Proteus mirabilis HI4320
45 group_55 PMI_RS11200 2463794 2464537 -1 SDR family oxidoreductase Proteus mirabilis HI4320
46 group_55 PMI_RS14395 3193116 3193871 -1 SDR family NAD(P)-dependent oxidoreductase Proteus mirabilis HI4320
47 group_55 PMI_RS14870 3300848 3301597 -1 D-threitol dehydrogenase Proteus mirabilis HI4320
48 group_341 PMI_RS15835 3516230 3516985 -1 fabG 3-oxoacyl-ACP reductase FabG Proteus mirabilis HI4320