COG0831


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0831, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Urease gamma subunit
Function(s) descr. Amino acid transport and metabolism (E)

Occurence in the database

COG0831 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1162 FBDBKF_06670 173521 173823 -1 Urease subunit gamma Morganella morganii S1
1 group_1162 EHELCC_09715 174093 174395 -1 Urease subunit gamma Morganella morganii S2
2 group_1162 NLDBIP_10095 174093 174395 -1 Urease subunit gamma Morganella morganii S4
3 group_1162 LHKJJB_07660 42843 43145 1 Urease subunit gamma Morganella morganii S3
4 group_1162 HKOGLL_07210 42843 43145 1 Urease subunit gamma Morganella morganii S5
5 group_1162 F4V73_RS15270 40461 40763 1 urease subunit gamma Morganella psychrotolerans
6 group_1162 PMI_RS18325 4024741 4025043 1 ureA urease subunit gamma Proteus mirabilis HI4320