COG0791


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0791, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Cell wall-associated hydrolase, NlpC_P60 family
Function(s) descr. Cell wall/membrane/envelope biogenesis (M)

Occurence in the database

COG0791 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1797 FBDBKF_13340 45258 45743 -1 nlpC Cell wall-associated hydrolase, NlpC_P60 family Morganella morganii S1
1 group_1982 FBDBKF_14870 74753 75307 1 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase Morganella morganii S1
2 group_1797 EHELCC_08755 229448 229933 1 nlpC Cell wall-associated hydrolase, NlpC_P60 family Morganella morganii S2
3 group_1982 EHELCC_15675 104829 105383 1 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase Morganella morganii S2
4 group_1797 NLDBIP_09080 229448 229933 1 nlpC Cell wall-associated hydrolase, NlpC_P60 family Morganella morganii S4
5 group_1982 NLDBIP_16205 104829 105383 1 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase Morganella morganii S4
6 group_1797 LHKJJB_05185 27226 27711 -1 nlpC Cell wall-associated hydrolase, NlpC_P60 family Morganella morganii S3
7 group_1982 LHKJJB_15635 11303 11857 -1 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase Morganella morganii S3
8 group_1797 HKOGLL_05730 214039 214524 1 nlpC Cell wall-associated hydrolase, NlpC_P60 family Morganella morganii S5
9 group_1982 HKOGLL_14755 10515 11069 -1 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase Morganella morganii S5
10 group_1797 F4V73_RS03420 730284 730769 1 NlpC/P60 family protein Morganella psychrotolerans
11 group_1982 F4V73_RS07670 1604317 1604871 1 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase Morganella psychrotolerans
12 group_1982 PMI_RS04080 913552 914166 -1 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase Proteus mirabilis HI4320
13 group_1797 PMI_RS05105 1115210 1115701 1 NlpC/P60 family protein Proteus mirabilis HI4320