Homologs in group_1797

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_08755 EHELCC_08755 100.0 Morganella morganii S2 nlpC Cell wall-associated hydrolase, NlpC_P60 family
NLDBIP_09080 NLDBIP_09080 100.0 Morganella morganii S4 nlpC Cell wall-associated hydrolase, NlpC_P60 family
LHKJJB_05185 LHKJJB_05185 100.0 Morganella morganii S3 nlpC Cell wall-associated hydrolase, NlpC_P60 family
HKOGLL_05730 HKOGLL_05730 100.0 Morganella morganii S5 nlpC Cell wall-associated hydrolase, NlpC_P60 family
F4V73_RS03420 F4V73_RS03420 91.3 Morganella psychrotolerans - NlpC/P60 family protein
PMI_RS05105 PMI_RS05105 71.9 Proteus mirabilis HI4320 - NlpC/P60 family protein

Distribution of the homologs in the orthogroup group_1797

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_1797

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P23898 2.22e-64 197 65 1 144 3 nlpC Probable endopeptidase NlpC Escherichia coli (strain K12)
Q57223 3.08e-52 166 49 0 161 3 HI_1314 Probable endopeptidase HI_1314 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P0AFV7 8.31e-32 115 45 1 121 3 mepS Murein DD-endopeptidase MepS/Murein LD-carboxypeptidase Shigella flexneri
P0AFV4 8.31e-32 115 45 1 121 1 mepS Murein DD-endopeptidase MepS/Murein LD-carboxypeptidase Escherichia coli (strain K12)
P0AFV5 8.31e-32 115 45 1 121 3 mepS Murein DD-endopeptidase MepS/Murein LD-carboxypeptidase Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AFV6 8.31e-32 115 45 1 121 3 mepS Murein DD-endopeptidase MepS/Murein LD-carboxypeptidase Escherichia coli O157:H7
P45296 5.86e-30 110 40 1 132 3 nlpC Probable endopeptidase NlpC homolog Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P0DX27 2e-17 81 38 2 112 1 CDR20291_0971 Peptidoglycan hydrolase Cwl0971 Clostridioides difficile (strain R20291)
P76190 6.31e-16 75 38 4 121 1 mepH Murein DD-endopeptidase MepH Escherichia coli (strain K12)
P96740 1.3e-15 76 33 1 127 1 pgdS Gamma-DL-glutamyl hydrolase Bacillus subtilis (strain 168)
P96740 5.21e-12 65 32 5 138 1 pgdS Gamma-DL-glutamyl hydrolase Bacillus subtilis (strain 168)
P96740 5.63e-12 65 34 3 108 1 pgdS Gamma-DL-glutamyl hydrolase Bacillus subtilis (strain 168)
P54421 1.41e-13 70 37 5 121 1 lytE Probable peptidoglycan endopeptidase LytE Bacillus subtilis (strain 168)
O07532 4.08e-13 69 40 5 108 1 lytF Peptidoglycan endopeptidase LytF Bacillus subtilis (strain 168)
Q47151 4.23e-13 67 35 3 118 3 yafL Probable endopeptidase YafL Escherichia coli (strain K12)
Q8NNK6 6.9e-12 63 38 3 95 3 Cgl2188 Probable endopeptidase Cgl2188 Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
A4QFQ3 7.1e-12 63 38 3 95 1 cgR_2070 Probable endopeptidase cgR_2070 Corynebacterium glutamicum (strain R)
P21171 7.97e-12 65 38 4 113 1 iap Probable endopeptidase p60 Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)
Q01836 1.49e-11 64 38 4 113 3 iap Probable endopeptidase p60 Listeria innocua serovar 6a (strain ATCC BAA-680 / CLIP 11262)
O31852 1.58e-11 64 35 7 155 1 cwlS D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS Bacillus subtilis (strain 168)
Q01838 3.82e-11 63 36 4 111 3 iap Probable endopeptidase p60 Listeria seeligeri
Q01839 4.95e-11 63 40 3 100 3 iap Probable endopeptidase p60 Listeria welshimeri
O35010 8.39e-11 62 33 3 109 1 ykfC Gamma-D-glutamyl-L-lysine dipeptidyl-peptidase Bacillus subtilis (strain 168)
Q01837 2.58e-10 61 36 5 112 3 iap Probable endopeptidase p60 Listeria ivanovii
P67474 2.6e-10 60 38 2 84 3 BQ2027_MB2213C Probable endopeptidase Mb2213c Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P9WHU3 2.6e-10 60 38 2 84 1 Rv2190c Probable endopeptidase Rv2190c Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WHU2 2.6e-10 60 38 2 84 3 MT2245 Probable endopeptidase MT2245 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
Q736M3 1.52e-09 58 37 2 83 1 ykfC Gamma-D-glutamyl-L-lysine dipeptidyl-peptidase Bacillus cereus (strain ATCC 10987 / NRS 248)
P96645 1.64e-09 58 36 5 110 1 cwlT Bifunctional muramidase/DL-endopeptidase CwlT Bacillus subtilis (strain 168)
Q01835 2.26e-09 58 39 4 97 3 iap Probable endopeptidase p60 Listeria grayi
Q65NQ9 6.8e-09 57 34 4 111 3 cwlO Peptidoglycan DL-endopeptidase CwlO Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / CCUG 7422 / NBRC 12200 / NCIMB 9375 / NCTC 10341 / NRRL NRS-1264 / Gibson 46)
P13692 7.3e-09 57 36 1 85 3 None Protein P54 Enterococcus faecium
P40767 8.37e-08 53 35 5 113 1 cwlO Peptidoglycan DL-endopeptidase CwlO Bacillus subtilis (strain 168)
P9WHU5 1.14e-05 47 31 4 109 1 ripB Peptidoglycan endopeptidase RipB Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WHU4 1.14e-05 47 31 4 109 3 ripB Peptidoglycan endopeptidase RipB Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_13340
Feature type CDS
Gene nlpC
Product Cell wall-associated hydrolase, NlpC_P60 family
Location 45258 - 45743 (strand: -1)
Length 486 (nucleotides) / 161 (amino acids)

Contig

Accession contig_16
Length 109220 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1797
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF00877 NlpC/P60 family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0791 Cell wall/membrane/envelope biogenesis (M) M Cell wall-associated hydrolase, NlpC_P60 family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K13695 probable lipoprotein NlpC - -

Protein Sequence

MKIIFRSLLFICVLAVVGCSSTPRKYHAPPIKTELSDPIMVIAQLREQLSQWYGTPYHYGGMDLNGIDCSGFVYRTFNDRFAISLPRTTKAQTTYGTRIDVEDLQPGDLVFFKTGGGENGLHVGIYDSDRAFIHASTSKGVMRSSLDNVYWKKVFWQARRL

Flanking regions ( +/- flanking 50bp)

TATTAATACAGTAATGCGGGTTGAAGGTCTGCCGCACCGGGGATAATACAATGAAAATCATATTCCGTTCTCTGCTTTTTATCTGCGTATTAGCCGTTGTCGGCTGTTCATCAACGCCGCGTAAATATCATGCGCCGCCGATAAAAACAGAATTATCGGACCCGATTATGGTGATTGCCCAGTTGCGGGAACAATTATCACAATGGTACGGCACACCATATCATTACGGCGGAATGGATTTAAACGGTATTGATTGTTCCGGCTTTGTCTACCGGACATTTAATGACCGCTTTGCTATTTCTCTGCCGCGCACCACCAAAGCGCAGACAACCTACGGCACTCGGATCGATGTTGAGGATTTACAGCCCGGTGACCTGGTATTCTTTAAAACCGGCGGCGGTGAGAACGGGCTGCATGTCGGCATTTATGATTCTGACCGTGCCTTTATTCATGCCTCGACCAGTAAAGGAGTGATGCGTTCCAGCCTGGATAACGTTTACTGGAAAAAAGTCTTCTGGCAGGCGCGCAGACTTTAAAATCACCGGGATAAATATGCTATCTTATCGGCAGCCTATTTTTTCCGGGG