Homologs in group_3307

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_14615 EHELCC_14615 100.0 Morganella morganii S2 - Restriction endonuclease subunit S
NLDBIP_14445 NLDBIP_14445 100.0 Morganella morganii S4 - Restriction endonuclease subunit S
LHKJJB_14900 LHKJJB_14900 100.0 Morganella morganii S3 - Restriction endonuclease subunit S
HKOGLL_13520 HKOGLL_13520 100.0 Morganella morganii S5 - Restriction endonuclease subunit S

Distribution of the homologs in the orthogroup group_3307

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3307

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P19705 1.21e-160 474 47 12 607 3 hsdS Type I restriction enzyme EcoEI specificity subunit Escherichia coli
P19704 9.32e-156 462 46 11 608 1 hsdS Type I restriction enzyme EcoAI specificity subunit Escherichia coli
Q57594 7.56e-14 77 31 7 174 1 MJ0130 Type I restriction enzyme MjaVII specificity subunit Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q57594 1.86e-13 76 27 8 219 1 MJ0130 Type I restriction enzyme MjaVII specificity subunit Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q57594 1.54e-10 67 29 4 163 1 MJ0130 Type I restriction enzyme MjaVII specificity subunit Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q57594 4.66e-08 59 25 5 194 1 MJ0130 Type I restriction enzyme MjaVII specificity subunit Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q60296 1.98e-12 73 28 3 178 3 hsdS Type I restriction enzyme MjaIX specificity subunit Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q60296 9.61e-05 48 23 6 196 3 hsdS Type I restriction enzyme MjaIX specificity subunit Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
P10485 2.86e-12 72 25 3 186 1 hsdS Type I restriction enzyme EcoR124I/EcoR124II specificity subunit Escherichia coli
P44152 2.01e-05 51 25 3 133 1 hsdS Type I restriction enzyme HindI specificity subunit Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P06187 2.07e-05 50 24 3 166 3 hsdS Type I restriction enzyme StySJI specificity subunit Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P06187 0.000301 47 24 7 241 3 hsdS Type I restriction enzyme StySJI specificity subunit Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_10280
Feature type CDS
Gene -
Product Restriction endonuclease subunit S
Location 9617 - 11365 (strand: 1)
Length 1749 (nucleotides) / 582 (amino acids)
In genomic island GI32

Contig

Accession contig_12
Length 141735 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3307
Orthogroup size 5
N. genomes 5

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Genomic region

Domains

PF01420 Type I restriction modification DNA specificity domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0732 Defense mechanisms (V) V Restriction endonuclease S subunit

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K01154 type I restriction enzyme, S subunit [EC:3.1.21.3] - -

Protein Sequence

MTVEKLITDHIDIWSSALQTRSAASRGSNGKIDLYGIKKLRELILELAVRGKLVPQDPNDEPASELLKQIAKERNDLVKNKVIRKPKALEQIALANTPFDLPDGWEWCYLNDIGNWGAGATPSRSNSKYYNGEIPWFKSGELSSDFISDSEEKITELALQECSLRDNKAGDVLIAMYGATIGKTSILNVRGTTNQAVCACTPYSGISNIYLLTVLKAYKRIFIGMGAGGAQPNISREKLIATVFALPPKAEQNRIICKVDELMSLCDQLEQQSLSSLDAHQQLVETLLATLTDSQDTKELSDNWARISQYFGTLFTTEASIDALKQTILQLAVMGKLVPQDPNDEPAFELLKRIEQEKAELVKQGKIKKQKPLPPVSDEEKPFELPQGWEWCRIIEIAQVGTGATPSRDNPDYWETPEFNWVTSGETSLPFIFNTAEKISGKAVKETNVSIYSPGTLIIAMYGQGKTRGQITELCISAGTNQACAAIQLFNTNEYHRCYIKLFFEKSYKDLRELAAGGAQPNLNLAKVSNTLVPIPPLSEQIKITCKVEELIKVCDTLKSRLQSAQQTQLHLADALTDAALN

Flanking regions ( +/- flanking 50bp)

TTGCGCGATATTCTTGGCGCTGCACTGGCAGGCAATAAGGACGCTGACTGATGACCGTTGAGAAGCTGATTACCGACCATATCGATATCTGGTCTTCTGCCCTGCAAACCCGCTCCGCAGCCAGCCGTGGCAGCAATGGAAAAATCGATCTCTATGGTATTAAGAAACTGCGTGAGCTGATTCTGGAACTGGCGGTACGTGGAAAACTGGTGCCGCAGGACCCGAATGATGAACCGGCGTCGGAGTTGCTTAAACAAATTGCGAAAGAAAGGAATGATTTAGTTAAGAATAAAGTGATTAGGAAACCTAAAGCACTTGAACAAATCGCACTAGCTAACACACCCTTCGATTTACCTGATGGTTGGGAATGGTGTTATTTAAATGATATTGGTAATTGGGGGGCTGGAGCCACACCAAGCCGCTCTAATTCAAAATATTATAATGGTGAAATTCCGTGGTTTAAGTCAGGTGAACTCTCCTCAGATTTTATTTCTGATTCAGAGGAGAAAATCACTGAACTTGCCTTGCAGGAGTGTTCACTTCGCGATAATAAAGCCGGGGATGTGTTGATTGCGATGTATGGGGCAACAATTGGTAAGACATCGATCTTAAATGTTCGTGGTACAACTAATCAGGCAGTATGTGCCTGTACCCCATACAGTGGGATTTCTAATATATATTTGTTAACCGTTTTAAAAGCTTATAAGCGAATTTTTATTGGTATGGGGGCTGGTGGAGCTCAGCCGAATATATCAAGAGAAAAGCTTATTGCTACTGTATTTGCTCTTCCGCCTAAAGCCGAACAAAACCGAATCATCTGCAAGGTCGATGAACTAATGTCCCTTTGCGATCAACTGGAACAGCAATCGCTGAGCAGTCTGGATGCACATCAGCAACTGGTAGAAACTCTGCTGGCAACGCTGACCGACAGCCAAGATACCAAAGAGCTTTCTGACAACTGGGCGCGAATCAGCCAGTATTTTGGCACGCTGTTTACCACCGAAGCCAGTATCGATGCGCTTAAGCAAACCATCCTGCAATTAGCGGTAATGGGTAAACTTGTGCCGCAGGATCCTAACGACGAACCTGCTTTTGAACTGCTTAAACGTATTGAGCAGGAGAAAGCTGAGCTGGTAAAACAAGGGAAAATTAAAAAACAAAAACCGTTGCCGCCAGTGAGTGATGAGGAAAAACCATTTGAATTACCGCAGGGGTGGGAGTGGTGTCGTATAATTGAAATAGCTCAGGTTGGTACAGGGGCAACCCCATCCAGGGATAATCCTGATTATTGGGAGACCCCTGAGTTTAACTGGGTTACAAGTGGTGAAACTTCTTTACCATTTATATTTAATACAGCTGAAAAAATTTCAGGGAAAGCTGTAAAAGAAACAAATGTATCTATTTACTCTCCTGGTACACTTATTATTGCGATGTATGGCCAAGGAAAAACTCGCGGTCAGATAACTGAGTTATGTATTTCTGCAGGAACAAACCAGGCTTGTGCAGCAATTCAGCTTTTTAATACAAATGAATACCATCGTTGTTATATAAAATTATTTTTCGAAAAATCCTATAAGGATTTAAGAGAGTTAGCAGCAGGTGGAGCACAGCCAAATTTAAATTTGGCAAAAGTATCAAATACATTAGTTCCTATACCACCGCTAAGTGAACAAATAAAAATAACCTGCAAGGTAGAAGAACTAATTAAGGTTTGCGACACTCTCAAATCCCGACTGCAATCCGCCCAACAAACCCAGCTCCATCTGGCGGACGCACTCACTGACGCAGCATTAAACTAAGGAACAGACGATGCCGGTTCATCATGCTATCTGGCGGGTCGGAGATAAAC