COG0685


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0685, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description 5,10-methylenetetrahydrofolate reductase
Function(s) descr. Amino acid transport and metabolism (E)

Occurence in the database

COG0685 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1748 FBDBKF_12180 92823 93722 1 metF methylenetetrahydrofolate reductase Morganella morganii S1
1 group_1748 EHELCC_14125 40983 41882 -1 metF methylenetetrahydrofolate reductase Morganella morganii S2
2 group_1748 NLDBIP_15220 44920 45819 -1 metF methylenetetrahydrofolate reductase Morganella morganii S4
3 group_1748 LHKJJB_15390 92823 93722 1 metF methylenetetrahydrofolate reductase Morganella morganii S3
4 group_1748 HKOGLL_14510 79486 80385 1 metF methylenetetrahydrofolate reductase Morganella morganii S5
5 group_1748 F4V73_RS16990 20595 21497 1 metF methylenetetrahydrofolate reductase Morganella psychrotolerans
6 group_1748 PMI_RS14495 3213956 3214855 1 metF methylenetetrahydrofolate reductase Proteus mirabilis HI4320