COG0475


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0475, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Kef-type K+ transport system, membrane component KefB
Function(s) descr. Inorganic ion transport and metabolism (P)

Occurence in the database

COG0475 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1691 FBDBKF_11790 7878 9731 -1 kefB glutathione-regulated potassium-efflux system protein KefB Morganella morganii S1
1 group_1691 EHELCC_14515 124974 126827 1 kefB glutathione-regulated potassium-efflux system protein KefB Morganella morganii S2
2 group_1691 NLDBIP_15610 128911 130764 1 kefB glutathione-regulated potassium-efflux system protein KefB Morganella morganii S4
3 group_1691 LHKJJB_15000 7878 9731 -1 kefB glutathione-regulated potassium-efflux system protein KefB Morganella morganii S3
4 group_1691 HKOGLL_19285 3620 5473 1 kefB glutathione-regulated potassium-efflux system protein KefB Morganella morganii S5
5 group_1691 F4V73_RS14865 208494 210332 1 kefB glutathione-regulated potassium-efflux system protein KefB Morganella psychrotolerans
6 group_1691 PMI_RS13855 3076116 3077978 -1 kefB glutathione-regulated potassium-efflux system protein KefB Proteus mirabilis HI4320