COG0440


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0440, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 13 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Acetolactate synthase, small subunit
Function(s) descr. Amino acid transport and metabolism (E)

Occurence in the database

COG0440 is associated with 13 different proteins (see tab "Protein list" and "Profile")
The 13 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2647 FBDBKF_04390 68323 68814 -1 ilvN acetolactate synthase small subunit Morganella morganii S1
1 group_2225 FBDBKF_17015 32496 32780 -1 ilvN acetolactate synthase small subunit Morganella morganii S1
2 group_2647 EHELCC_05680 127780 128271 -1 ilvN acetolactate synthase small subunit Morganella morganii S2
3 group_2225 EHELCC_16575 35730 36014 1 ilvN acetolactate synthase small subunit Morganella morganii S2
4 group_2647 NLDBIP_06000 168845 169336 -1 ilvN acetolactate synthase small subunit Morganella morganii S4
5 group_2225 NLDBIP_16785 35730 36014 1 ilvN acetolactate synthase small subunit Morganella morganii S4
6 group_2647 LHKJJB_02880 146369 146860 -1 ilvN acetolactate synthase small subunit Morganella morganii S3
7 group_2225 LHKJJB_16685 32496 32780 -1 ilvN acetolactate synthase small subunit Morganella morganii S3
8 group_2647 HKOGLL_06355 68233 68724 -1 ilvN acetolactate synthase small subunit Morganella morganii S5
9 group_2225 HKOGLL_17650 32496 32780 -1 ilvN acetolactate synthase small subunit Morganella morganii S5
10 group_2647 F4V73_RS08835 1829451 1829942 -1 ilvN acetolactate synthase small subunit Morganella psychrotolerans
11 group_2225 F4V73_RS18475 31128 31412 -1 ilvN acetolactate synthase small subunit Morganella psychrotolerans
12 group_2225 PMI_RS17495 3840428 3840712 1 ilvN acetolactate synthase small subunit Proteus mirabilis HI4320