COG0391


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0391, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Archaeal 2-phospho-L-lactate transferase/Bacterial gluconeogenesis factor, CofD/UPF0052 family
Function(s) descr. Carbohydrate transport and metabolism (G)
Coenzyme transport and metabolism (H)

Occurence in the database

COG0391 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1487 FBDBKF_09595 16468 17376 1 cofD Archaeal 2-phospho-L-lactate transferase/Bacterial gluconeogenesis factor, CofD/UPF0052 family Morganella morganii S1
1 group_1487 EHELCC_04395 208433 209341 1 cofD Archaeal 2-phospho-L-lactate transferase/Bacterial gluconeogenesis factor, CofD/UPF0052 family Morganella morganii S2
2 group_1487 NLDBIP_04395 208229 209137 1 cofD Archaeal 2-phospho-L-lactate transferase/Bacterial gluconeogenesis factor, CofD/UPF0052 family Morganella morganii S4
3 group_1487 LHKJJB_14235 126241 127149 -1 cofD Archaeal 2-phospho-L-lactate transferase/Bacterial gluconeogenesis factor, CofD/UPF0052 family Morganella morganii S3
4 group_1487 HKOGLL_12300 17249 18157 1 cofD Archaeal 2-phospho-L-lactate transferase/Bacterial gluconeogenesis factor, CofD/UPF0052 family Morganella morganii S5
5 group_1487 F4V73_RS00745 156242 157150 -1 yvcK uridine diphosphate-N-acetylglucosamine-binding protein YvcK Morganella psychrotolerans
6 group_1487 PMI_RS03000 662443 663378 -1 yvcK uridine diphosphate-N-acetylglucosamine-binding protein YvcK Proteus mirabilis HI4320