COG0240


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0240, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 8 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Glycerol-3-phosphate dehydrogenase
Function(s) descr. Energy production and conversion (C)

Occurence in the database

COG0240 is associated with 8 different proteins (see tab "Protein list" and "Profile")
The 8 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2173 FBDBKF_16345 56642 57655 1 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase Morganella morganii S1
1 group_2173 EHELCC_16380 56642 57655 1 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase Morganella morganii S2
2 group_2173 NLDBIP_16960 4515 5528 -1 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase Morganella morganii S4
3 group_2173 LHKJJB_16880 7617 8630 -1 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase Morganella morganii S3
4 group_2173 HKOGLL_16960 56642 57655 1 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase Morganella morganii S5
5 group_2173 F4V73_RS17235 78622 79635 -1 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase Morganella psychrotolerans
6 group_4299 PMI_RS01145 282033 283190 1 NAD/NADP-dependent octopine/nopaline dehydrogenase family protein Proteus mirabilis HI4320
7 group_2173 PMI_RS15745 3497824 3498837 1 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase Proteus mirabilis HI4320