Orthogroup:group_2209


Homologs in group_2209

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_16900 FBDBKF_16900 Morganella morganii S1 ubiD 4-hydroxy-3-polyprenylbenzoate decarboxylase
EHELCC_19530 EHELCC_19530 Morganella morganii S2 ubiD 4-hydroxy-3-polyprenylbenzoate decarboxylase
NLDBIP_16900 NLDBIP_16900 Morganella morganii S4 ubiD 4-hydroxy-3-polyprenylbenzoate decarboxylase
LHKJJB_16570 LHKJJB_16570 Morganella morganii S3 ubiD 4-hydroxy-3-polyprenylbenzoate decarboxylase
HKOGLL_17535 HKOGLL_17535 Morganella morganii S5 ubiD 4-hydroxy-3-polyprenylbenzoate decarboxylase
F4V73_RS18370 F4V73_RS18370 Morganella psychrotolerans ubiD 4-hydroxy-3-polyprenylbenzoate decarboxylase
PMI_RS17625 PMI_RS17625 Proteus mirabilis HI4320 ubiD 4-hydroxy-3-polyprenylbenzoate decarboxylase

Distribution of group_2209 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2209 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2209

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2209.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 ubiD 7

Product

# Product Occurence
1 4-hydroxy-3-polyprenylbenzoate decarboxylase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0043 7 H Coenzyme transport and metabolism (H) 3-polyprenyl-4-hydroxybenzoate decarboxylase

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01977 7 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Rift-related domain
PF20695 7 3-octaprenyl-4-hydroxybenzoate carboxy-lyase N-terminal domain
PF20696 7 3-octaprenyl-4-hydroxybenzoate carboxy-lyase C-terminal domain

Annotations of the 179 SwissProt hits

Annotation Number of occurrences
3-octaprenyl-4-hydroxybenzoate carboxy-lyase 151
4-hydroxybenzoate decarboxylase subunit C 1
Anhydromevalonate phosphate decarboxylase 7
Ferulic acid decarboxylase 1 3
Gallate decarboxylase 1
Phenolic acid decarboxylase 4
Pyrrole-2-carboxylic acid decarboxylase 1
Uncharacterized protein AF_0209 1
Uncharacterized protein APE_1571.1 1
Uncharacterized protein CCA_00454 1
Uncharacterized protein CT_085 1
Uncharacterized protein HP_0396 1
Uncharacterized protein RP821 1
Uncharacterized protein TC_0359 1
Uncharacterized protein aq_1612 1
Uncharacterized protein in cooM 5'region 1
Uncharacterized protein jhp_0985 1
Uncharacterized protein sll0936 1

Protein length

Min length 489
Max length 490
Mean length (sd) 489.9 (0.4)
Median length 490.0

Protein length distribution