COG0236


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0236, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 10 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Acyl carrier protein
Function(s) descr. Lipid transport and metabolism (I)

Occurence in the database

COG0236 is associated with 10 different proteins (see tab "Protein list" and "Profile")
The 10 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_383 FBDBKF_14710 40382 40618 -1 acpP acyl carrier protein Morganella morganii S1
1 group_383 EHELCC_15515 70458 70694 -1 acpP acyl carrier protein Morganella morganii S2
2 group_383 NLDBIP_16045 70458 70694 -1 acpP acyl carrier protein Morganella morganii S4
3 group_383 LHKJJB_15795 45992 46228 1 acpP acyl carrier protein Morganella morganii S3
4 group_383 HKOGLL_14915 45204 45440 1 acpP acyl carrier protein Morganella morganii S5
5 group_383 F4V73_RS07505 1569101 1569340 -1 acpP acyl carrier protein Morganella psychrotolerans
6 group_3853 F4V73_RS11950 545786 546049 1 phosphopantetheine-binding protein Morganella psychrotolerans
7 group_383 F4V73_RS11955 546062 546310 1 acyl carrier protein Morganella psychrotolerans
8 group_383 PMI_RS04230 952065 952301 1 acpP acyl carrier protein Proteus mirabilis HI4320
9 group_3853 PMI_RS14385 3192192 3192512 -1 phosphopantetheine-binding protein Proteus mirabilis HI4320