COG0118


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0118, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Imidazoleglycerol phosphate synthase glutamine amidotransferase subunit HisH
Function(s) descr. Amino acid transport and metabolism (E)

Occurence in the database

COG0118 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1196 FBDBKF_06910 46721 47317 -1 hisH imidazole glycerol phosphate synthase subunit HisH Morganella morganii S1
1 group_1196 EHELCC_04060 138869 139465 1 hisH imidazole glycerol phosphate synthase subunit HisH Morganella morganii S2
2 group_1196 NLDBIP_04060 138665 139261 1 hisH imidazole glycerol phosphate synthase subunit HisH Morganella morganii S4
3 group_1196 LHKJJB_09890 138779 139375 1 hisH imidazole glycerol phosphate synthase subunit HisH Morganella morganii S3
4 group_1196 HKOGLL_09085 51677 52273 -1 hisH imidazole glycerol phosphate synthase subunit HisH Morganella morganii S5
5 group_1196 F4V73_RS01095 231652 232248 -1 hisH imidazole glycerol phosphate synthase subunit HisH Morganella psychrotolerans
6 group_1196 PMI_RS03255 719153 719743 -1 hisH imidazole glycerol phosphate synthase subunit HisH Proteus mirabilis HI4320