COG0077


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0077, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 9 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Prephenate dehydratase
Function(s) descr. Amino acid transport and metabolism (E)

Occurence in the database

COG0077 is associated with 9 different proteins (see tab "Protein list" and "Profile")
The 9 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2047 FBDBKF_15345 77027 78178 -1 pheA bifunctional chorismate mutase/prephenate dehydratase Morganella morganii S1
1 group_2047 EHELCC_10900 6728 7879 1 pheA bifunctional chorismate mutase/prephenate dehydratase Morganella morganii S2
2 group_2047 NLDBIP_11245 6728 7879 1 pheA bifunctional chorismate mutase/prephenate dehydratase Morganella morganii S4
3 group_2047 LHKJJB_11105 6728 7879 1 pheA bifunctional chorismate mutase/prephenate dehydratase Morganella morganii S3
4 group_2047 HKOGLL_09715 6728 7879 1 pheA bifunctional chorismate mutase/prephenate dehydratase Morganella morganii S5
5 group_3823 F4V73_RS02705 570041 570565 1 prephenate dehydratase domain-containing protein Morganella psychrotolerans
6 group_2047 F4V73_RS12110 6800 7951 1 pheA bifunctional chorismate mutase/prephenate dehydratase Morganella psychrotolerans
7 group_2047 PMI_RS01895 445018 446175 -1 pheA bifunctional chorismate mutase/prephenate dehydratase Proteus mirabilis HI4320
8 group_3823 PMI_RS11700 2585701 2586225 1 hypothetical protein Proteus mirabilis HI4320