Homologs in group_3823

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1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
PMI_RS11700 PMI_RS11700 60.7 Proteus mirabilis HI4320 - hypothetical protein

Distribution of the homologs in the orthogroup group_3823

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3823

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P39638 9.91e-12 63 28 5 181 1 bacA Prephenate decarboxylase Bacillus subtilis (strain 168)
Q8KWT6 6.61e-10 58 28 5 181 3 bacA Prephenate decarboxylase Bacillus subtilis
Q8KWT1 4.53e-09 56 28 5 181 3 bacA Prephenate decarboxylase Bacillus amyloliquefaciens

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS02705
Feature type CDS
Gene -
Product prephenate dehydratase domain-containing protein
Location 570041 - 570565 (strand: 1)
Length 525 (nucleotides) / 174 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3823
Orthogroup size 2
N. genomes 2

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Genomic region

Domains

PF00800 Prephenate dehydratase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0077 Amino acid transport and metabolism (E) E Prephenate dehydratase

Protein Sequence

MLTIHTLGPNGTNCEKAAHYWLSENNIKGNVKLYQTLEKAVEAVKCDNDGVLLGCIVYPDLHNIVFQNLLSLELKACFVLDTHNMLLASRHTDYNDIRHVGSHPAPQDLFNELPLLNKDVRKSLFTSNSEAGVQCAHGVIDACITTLSTAQKYHLHILHDFGPVPMGFSIHAPK

Flanking regions ( +/- flanking 50bp)

ATTTAATCAGTAAAACCGGAAGAATATAATTATCTGAAGGAGTATTTATCGTGTTAACCATTCATACACTCGGTCCTAACGGAACGAATTGTGAGAAAGCAGCGCATTACTGGTTAAGTGAAAATAATATAAAAGGCAATGTGAAATTATATCAGACACTGGAAAAAGCCGTTGAAGCGGTAAAGTGTGATAACGACGGCGTATTGCTTGGCTGCATTGTTTATCCGGATTTACATAATATTGTTTTTCAGAATCTGTTATCACTGGAATTAAAGGCCTGCTTTGTGCTGGATACACATAATATGTTACTTGCCAGCCGTCACACTGATTATAACGATATCCGCCATGTCGGTTCTCATCCGGCTCCGCAGGATCTGTTTAATGAATTACCGCTGTTGAATAAAGATGTCAGAAAGTCACTGTTTACCTCAAACAGTGAGGCCGGTGTGCAATGTGCGCATGGTGTTATTGATGCCTGTATTACCACACTCAGTACGGCACAAAAATACCATCTGCATATTTTGCATGATTTCGGACCGGTTCCGATGGGCTTTTCTATTCATGCCCCTAAATAGCATTTCTTTTATTTAATTTCATTTTATTGAATTTAATTTACTACTTCAGC