Orthogroup:group_984


Homologs in group_984

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_05435 FBDBKF_05435 Morganella morganii S1 gapA glyceraldehyde-3-phosphate dehydrogenase
EHELCC_12155 EHELCC_12155 Morganella morganii S2 gapA glyceraldehyde-3-phosphate dehydrogenase
NLDBIP_12495 NLDBIP_12495 Morganella morganii S4 gapA glyceraldehyde-3-phosphate dehydrogenase
LHKJJB_12355 LHKJJB_12355 Morganella morganii S3 gapA glyceraldehyde-3-phosphate dehydrogenase
HKOGLL_10970 HKOGLL_10970 Morganella morganii S5 gapA glyceraldehyde-3-phosphate dehydrogenase
F4V73_RS03860 F4V73_RS03860 Morganella psychrotolerans gapA glyceraldehyde-3-phosphate dehydrogenase
PMI_RS07290 PMI_RS07290 Proteus mirabilis HI4320 gapA glyceraldehyde-3-phosphate dehydrogenase

Distribution of group_984 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_984 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_984

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_984.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 gapA 7

Product

# Product Occurence
1 glyceraldehyde-3-phosphate dehydrogenase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0057 7 G Carbohydrate transport and metabolism (G) Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K00134 7 glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] Glycolysis / Gluconeogenesis
Carbon fixation in photosynthetic organisms
Metabolic pathways
Biosynthesis of secondary metabolites
Microbial metabolism in diverse environments
Carbon metabolism
Biosynthesis of amino acids
HIF-1 signaling pathway
Alzheimer disease
Pathogenic Escherichia coli infection
Salmonella infection
Diabetic cardiomyopathy		 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate
Glycolysis, core module involving three-carbon compounds
Gluconeogenesis, oxaloacetate => fructose-6P
Reductive pentose phosphate cycle (Calvin cycle)
Semi-phosphorylative Entner-Doudoroff pathway, gluconate => glycerate-3P
D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00044 7 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
PF02800 7 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain

Annotations of the 369 SwissProt hits

Annotation Number of occurrences
D-erythrose-4-phosphate dehydrogenase 92
Glyceraldehyde-3-phosphate dehydrogenase 129
Glyceraldehyde-3-phosphate dehydrogenase (Fragment) 17
Glyceraldehyde-3-phosphate dehydrogenase 1 26
Glyceraldehyde-3-phosphate dehydrogenase 1 (Fragment) 1
Glyceraldehyde-3-phosphate dehydrogenase 1, cytosolic 3
Glyceraldehyde-3-phosphate dehydrogenase 2 27
Glyceraldehyde-3-phosphate dehydrogenase 2 (Fragment) 1
Glyceraldehyde-3-phosphate dehydrogenase 2, cytosolic 2
Glyceraldehyde-3-phosphate dehydrogenase 2, cytosolic (Fragment) 1
Glyceraldehyde-3-phosphate dehydrogenase 3 6
Glyceraldehyde-3-phosphate dehydrogenase 3, cytosolic 2
Glyceraldehyde-3-phosphate dehydrogenase 3.1 1
Glyceraldehyde-3-phosphate dehydrogenase 4 1
Glyceraldehyde-3-phosphate dehydrogenase A 2
Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic 4
Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) 3
Glyceraldehyde-3-phosphate dehydrogenase B 1
Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic 2
Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic (Fragment) 1
Glyceraldehyde-3-phosphate dehydrogenase C 1
Glyceraldehyde-3-phosphate dehydrogenase GAPA1, chloroplastic 1
Glyceraldehyde-3-phosphate dehydrogenase GAPA2, chloroplastic 1
Glyceraldehyde-3-phosphate dehydrogenase GAPB, chloroplastic 1
Glyceraldehyde-3-phosphate dehydrogenase GAPC1, cytosolic 1
Glyceraldehyde-3-phosphate dehydrogenase GAPC2, cytosolic 1
Glyceraldehyde-3-phosphate dehydrogenase GAPCP1, chloroplastic 1
Glyceraldehyde-3-phosphate dehydrogenase GAPCP2, chloroplastic 1
Glyceraldehyde-3-phosphate dehydrogenase, chloroplastic 3
Glyceraldehyde-3-phosphate dehydrogenase, chromosomal 1
Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 20
Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (Fragment) 2
Glyceraldehyde-3-phosphate dehydrogenase, glycosomal 4
Glyceraldehyde-3-phosphate dehydrogenase, muscle 1
Glyceraldehyde-3-phosphate dehydrogenase, plasmid 1
Glyceraldehyde-3-phosphate dehydrogenase, testis-specific 5
Glyceraldehyde-3-phosphate dehydrogenase, testis-specific (Fragments) 1
Glyceraldehyde-3-phosphate dehydrogenase-like protein 1

Protein length

Unique protein length 331

Protein length distribution