Orthogroup:group_936


Homologs in group_936

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_05085 FBDBKF_05085 Morganella morganii S1 yciS DUF1049 domain-containing protein
EHELCC_12505 EHELCC_12505 Morganella morganii S2 yciS DUF1049 domain-containing protein
NLDBIP_12845 NLDBIP_12845 Morganella morganii S4 yciS DUF1049 domain-containing protein
LHKJJB_12705 LHKJJB_12705 Morganella morganii S3 yciS DUF1049 domain-containing protein
HKOGLL_11320 HKOGLL_11320 Morganella morganii S5 yciS DUF1049 domain-containing protein
F4V73_RS05540 F4V73_RS05540 Morganella psychrotolerans - LapA family protein
PMI_RS06345 PMI_RS06345 Proteus mirabilis HI4320 - lipopolysaccharide assembly protein LapA domain-containing protein

Distribution of group_936 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_936 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_936

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_936.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 yciS 5
2 - 2

Product

# Product Occurence
1 DUF1049 domain-containing protein 5
2 LapA family protein 1
3 lipopolysaccharide assembly protein LapA domain-containing protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3771 7 S Function unknown (S) Lipopolysaccharide assembly protein YciS/LapA, DUF1049 family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K08992 7 lipopolysaccharide assembly protein A - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF06305 7 Lipopolysaccharide assembly protein A domain

Annotations of the 3 SwissProt hits

Annotation Number of occurrences
Lipopolysaccharide assembly protein A 2
Probable lipopolysaccharide assembly protein A 1

Protein length

Min length 101
Max length 105
Mean length (sd) 101.6 (1.5)
Median length 101.0

Protein length distribution