Orthogroup:group_935


Homologs in group_935

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_05080 FBDBKF_05080 Morganella morganii S1 lapB lipopolysaccharide assembly protein LapB
EHELCC_12510 EHELCC_12510 Morganella morganii S2 lapB lipopolysaccharide assembly protein LapB
NLDBIP_12850 NLDBIP_12850 Morganella morganii S4 lapB lipopolysaccharide assembly protein LapB
LHKJJB_12710 LHKJJB_12710 Morganella morganii S3 lapB lipopolysaccharide assembly protein LapB
HKOGLL_11325 HKOGLL_11325 Morganella morganii S5 lapB lipopolysaccharide assembly protein LapB
F4V73_RS05535 F4V73_RS05535 Morganella psychrotolerans lapB lipopolysaccharide assembly protein LapB
PMI_RS06340 PMI_RS06340 Proteus mirabilis HI4320 lapB lipopolysaccharide assembly protein LapB

Distribution of group_935 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_935 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_935

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_935.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 lapB 7

Product

# Product Occurence
1 lipopolysaccharide assembly protein LapB 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2956 7 M Cell wall/membrane/envelope biogenesis (M) Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K19804 7 lipopolysaccharide assembly protein B - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF13176 7 Tetratricopeptide repeat
PF13432 1 Tetratricopeptide repeat
PF14559 1 Tetratricopeptide repeat
PF18073 7 Rubredoxin metal binding domain

Annotations of the 5 SwissProt hits

Annotation Number of occurrences
Lipopolysaccharide assembly protein B 4
Uncharacterized protein RP472 1

Protein length

Unique protein length 389

Protein length distribution