Orthogroup:group_928


Homologs in group_928

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_05040 FBDBKF_05040 Morganella morganii S1 rsxD electron transport complex subunit RsxD
EHELCC_12550 EHELCC_12550 Morganella morganii S2 rsxD electron transport complex subunit RsxD
NLDBIP_12890 NLDBIP_12890 Morganella morganii S4 rsxD electron transport complex subunit RsxD
LHKJJB_12750 LHKJJB_12750 Morganella morganii S3 rsxD electron transport complex subunit RsxD
HKOGLL_11365 HKOGLL_11365 Morganella morganii S5 rsxD electron transport complex subunit RsxD
F4V73_RS05480 F4V73_RS05480 Morganella psychrotolerans rsxD electron transport complex subunit RsxD
PMI_RS06305 PMI_RS06305 Proteus mirabilis HI4320 rsxD electron transport complex subunit RsxD

Distribution of group_928 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_928 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_928

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_928.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rsxD 7

Product

# Product Occurence
1 electron transport complex subunit RsxD 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG4658 7 C Energy production and conversion (C) Na+-translocating ferredoxin:NAD+ oxidoreductase RNF, RnfD subunit

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03614 7 H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF03116 7 NQR2, RnfD, RnfE family

Annotations of the 152 SwissProt hits

Annotation Number of occurrences
Ion-translocating oxidoreductase complex subunit D 113
Na(+)-translocating NADH-quinone reductase subunit B 37
Na(+)-translocating ferredoxin:NAD(+) oxidoreductase complex subunit D 1
Proton-translocating ferredoxin:NAD(+) oxidoreductase complex subunit D 1

Protein length

Min length 358
Max length 364
Mean length (sd) 363.1 (2.3)
Median length 364.0

Protein length distribution