Orthogroup:group_865


Homologs in group_865

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_04375 FBDBKF_04375 Morganella morganii S1 rsmH 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
EHELCC_05665 EHELCC_05665 Morganella morganii S2 rsmH 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
NLDBIP_05985 NLDBIP_05985 Morganella morganii S4 rsmH 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
LHKJJB_02865 LHKJJB_02865 Morganella morganii S3 rsmH 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
HKOGLL_06340 HKOGLL_06340 Morganella morganii S5 rsmH 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
F4V73_RS08820 F4V73_RS08820 Morganella psychrotolerans rsmH 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
PMI_RS10240 PMI_RS10240 Proteus mirabilis HI4320 rsmH 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH

Distribution of group_865 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_865 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_865

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_865.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rsmH 7

Product

# Product Occurence
1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0275 7 J Translation, ribosomal structure and biogenesis (J) 16S rRNA C1402 N4-methylase RsmH

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03438 7 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01795 7 MraW methylase family

Annotations of the 521 SwissProt hits

Annotation Number of occurrences
Ribosomal RNA small subunit methyltransferase H 517
Ribosomal RNA small subunit methyltransferase H (Fragment) 1
Ribosomal RNA small subunit methyltransferase H 1 1
Ribosomal RNA small subunit methyltransferase H 2 2

Protein length

Min length 313
Max length 316
Mean length (sd) 313.7 (1.3)
Median length 313.0

Protein length distribution