COG0650


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0650, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Formate hydrogenlyase subunit HyfC
Function(s) descr. Energy production and conversion (C)

Occurence in the database

COG0650 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_796 FBDBKF_03735 149883 150833 -1 hyfC Formate hydrogenlyase subunit HyfC Morganella morganii S1
1 group_796 EHELCC_06800 96270 97220 1 hyfC Formate hydrogenlyase subunit HyfC Morganella morganii S2
2 group_796 NLDBIP_07125 96143 97093 1 hyfC Formate hydrogenlyase subunit HyfC Morganella morganii S4
3 group_796 LHKJJB_06660 59889 60839 1 hyfC Formate hydrogenlyase subunit HyfC Morganella morganii S3
4 group_796 HKOGLL_04270 172548 173498 -1 hyfC Formate hydrogenlyase subunit HyfC Morganella morganii S5
5 group_796 F4V73_RS11135 366605 367555 1 respiratory chain complex I subunit 1 family protein Morganella psychrotolerans
6 group_796 PMI_RS12490 2769222 2770172 -1 respiratory chain complex I subunit 1 family protein Proteus mirabilis HI4320