Orthogroup:group_838



Homologs in group_838

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_04225 FBDBKF_04225 Morganella morganii S1 lpdA dihydrolipoyl dehydrogenase
EHELCC_05515 EHELCC_05515 Morganella morganii S2 lpdA dihydrolipoyl dehydrogenase
NLDBIP_05835 NLDBIP_05835 Morganella morganii S4 lpdA dihydrolipoyl dehydrogenase
LHKJJB_02715 LHKJJB_02715 Morganella morganii S3 lpdA dihydrolipoyl dehydrogenase
HKOGLL_06190 HKOGLL_06190 Morganella morganii S5 lpdA dihydrolipoyl dehydrogenase
F4V73_RS08675 F4V73_RS08675 Morganella psychrotolerans lpdA dihydrolipoyl dehydrogenase
PMI_RS10075 PMI_RS10075 Proteus mirabilis HI4320 lpdA dihydrolipoyl dehydrogenase

Distribution of group_838 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_838 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_838

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_838.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 lpdA 7

Product

# Product Occurence
1 dihydrolipoyl dehydrogenase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1249 7 C Energy production and conversion (C) Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K00382 7 dihydrolipoyl dehydrogenase [EC:1.8.1.4] Glycolysis / Gluconeogenesis
Citrate cycle (TCA cycle)
Glycine, serine and threonine metabolism
Valine, leucine and isoleucine degradation
Lysine degradation
Tryptophan metabolism
Pyruvate metabolism
Glyoxylate and dicarboxylate metabolism
Propanoate metabolism
Lipoic acid metabolism
Metabolic pathways
Biosynthesis of secondary metabolites
Microbial metabolism in diverse environments
Carbon metabolism
2-Oxocarboxylic acid metabolism
Biosynthesis of cofactors
Citrate cycle (TCA cycle, Krebs cycle)
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Lysine degradation, lysine => saccharopine => acetoacetyl-CoA
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Pyruvate oxidation, pyruvate => acetyl-CoA
Photorespiration
Glycine cleavage system

Pfam domain Annotation(s)

Domain ID Occurences Description
PF02852 7 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
PF07992 7 Pyridine nucleotide-disulphide oxidoreductase

Annotations of the 389 SwissProt hits

Annotation Number of occurrences
2-oxopropyl-CoM reductase, carboxylating 1
3-phenylpropionate/cinnamic acid dioxygenase ferredoxin--NAD(+) reductase component 1
34.2 kDa protein in rubredoxin operon 1
5,5'-dehydrodivanillate O-demethylase ferredoxin reductase subunit 1
Alkyl hydroperoxide reductase subunit F 13
Anthranilate 1,2-dioxygenase system ferredoxin--NAD(+) reductase component 1
Apoptosis-inducing factor 3 2
Assimilatory nitrate reductase electron transfer subunit 1
Benzene 1,2-dioxygenase system ferredoxin--NAD(+) reductase component 1
Benzene 1,2-dioxygenase system ferredoxin--NAD(+) reductase subunit 1
Biphenyl dioxygenase system ferredoxin--NAD(+) reductase component 1
Chlorobenzene dioxygenase, ferredoxin reductase component 1
Coenzyme A disulfide reductase 18
Dihydrolipoamide dehydrogenase 1
Dihydrolipoyl dehydrogenase 50
Dihydrolipoyl dehydrogenase (Fragment) 2
Dihydrolipoyl dehydrogenase 1, chloroplastic 1
Dihydrolipoyl dehydrogenase 1, mitochondrial 1
Dihydrolipoyl dehydrogenase 2 1
Dihydrolipoyl dehydrogenase 2, chloroplastic 1
Dihydrolipoyl dehydrogenase 2, mitochondrial 1
Dihydrolipoyl dehydrogenase 3 3
Dihydrolipoyl dehydrogenase, mitochondrial 14
Dihydrolipoyl dehydrogenase, mitochondrial (Fragment) 1
Ferredoxin--NAD(P)(+) reductase fdr 1
Ferredoxin--NADP reductase 14
Ferredoxin--NADP reductase 1 3
Glutathione amide reductase 1
Glutathione reductase 17
Glutathione reductase (Fragment) 1
Glutathione reductase, chloroplastic 2
Glutathione reductase, chloroplastic (Fragment) 2
Glutathione reductase, chloroplastic/mitochondrial 1
Glutathione reductase, cytosolic 4
Glutathione reductase, mitochondrial 4
Increased recombination centers protein 15 1
Leghemoglobin reductase 2
Mercuric reductase 13
Mercuric reductase (Fragments) 1
Monodehydroascorbate reductase 2, peroxisomal 1
Monodehydroascorbate reductase 3 1
Monodehydroascorbate reductase 3, cytosolic 1
Monodehydroascorbate reductase 5, chlorplastic 1
Monodehydroascorbate reductase, chloroplastic/mitochondrial 1
Mycothione reductase 2
NAD(P)H coenzyme A polysulfide/persulfide reductase 1
NAD(P)H dehydrogenase (quinone) 2
NAD(P)H sulfur oxidoreductase (CoA-dependent) 3
NADH dehydrogenase 1
NADH oxidase 8
NADH peroxidase 1
Nitric oxide reductase FlRd-NAD(+) reductase 41
Nitrite reductase [NAD(P)H] 1
Probable ferredoxin reductase CtmF 1
Probable glutathione reductase 2 1
Probable pyridine nucleotide-disulfide oxidoreductase RclA 1
Probable soluble pyridine nucleotide transhydrogenase 3
Putative thioredoxin reductase 1
Putidaredoxin reductase CamA 1
Rhodocoxin reductase 1
Rubredoxin-NAD(+) reductase 2
Soluble pyridine nucleotide transhydrogenase 91
Soluble pyridine nucleotide transhydrogenase (Fragment) 1
Sulfide dehydrogenase subunit alpha 1
Terpredoxin reductase 1
Thioredoxin reductase 6
Thioredoxin reductase (Fragment) 1
Thioredoxin reductase 1 1
Thioredoxin reductase 1, cytoplasmic 6
Thioredoxin reductase 1, mitochondrial 1
Thioredoxin reductase 2, mitochondrial 5
Thioredoxin reductase 3 2
Thioredoxin reductase SEP1 1
Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase component 2
Trypanothione reductase 5
Uncharacterized 19.7 kDa protein in mercuric resistance operon 1
Uncharacterized protein MJ0636 1
p-cumate 2,3-dioxygenase system, ferredoxin--NAD(+) reductase component 1

Protein length

Unique protein length 475

Protein length distribution