Orthogroup:group_823


Homologs in group_823

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_04130 FBDBKF_04130 Morganella morganii S1 gcvP aminomethyl-transferring glycine dehydrogenase
EHELCC_05420 EHELCC_05420 Morganella morganii S2 gcvP aminomethyl-transferring glycine dehydrogenase
NLDBIP_05740 NLDBIP_05740 Morganella morganii S4 gcvP aminomethyl-transferring glycine dehydrogenase
LHKJJB_02620 LHKJJB_02620 Morganella morganii S3 gcvP aminomethyl-transferring glycine dehydrogenase
HKOGLL_06095 HKOGLL_06095 Morganella morganii S5 gcvP aminomethyl-transferring glycine dehydrogenase
F4V73_RS08575 F4V73_RS08575 Morganella psychrotolerans gcvP aminomethyl-transferring glycine dehydrogenase
PMI_RS09955 PMI_RS09955 Proteus mirabilis HI4320 gcvP aminomethyl-transferring glycine dehydrogenase

Distribution of group_823 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_823 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_823

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_823.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 gcvP 7

Product

# Product Occurence
1 aminomethyl-transferring glycine dehydrogenase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1003 7 E Amino acid transport and metabolism (E) Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF02347 7 Glycine cleavage system P-protein
PF21478 7 Glycine dehydrogenase, C-terminal domain

Annotations of the 510 SwissProt hits

Annotation Number of occurrences
Glycine dehydrogenase (decarboxylating) 226
Glycine dehydrogenase (decarboxylating) (Fragment) 1
Glycine dehydrogenase (decarboxylating) 1 5
Glycine dehydrogenase (decarboxylating) 1, mitochondrial 1
Glycine dehydrogenase (decarboxylating) 2 5
Glycine dehydrogenase (decarboxylating) 2, mitochondrial 1
Glycine dehydrogenase (decarboxylating) A, mitochondrial 1
Glycine dehydrogenase (decarboxylating) B, mitochondrial 1
Glycine dehydrogenase (decarboxylating), mitochondrial 9
Probable glycine dehydrogenase (decarboxylating) 2
Probable glycine dehydrogenase (decarboxylating) subunit 1 141
Probable glycine dehydrogenase (decarboxylating) subunit 2 116
Putative glycine dehydrogenase (decarboxylating), mitochondrial 1

Protein length

Unique protein length 958

Protein length distribution