Orthogroup:group_820


Homologs in group_820

Help

7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_04115 FBDBKF_04115 Morganella morganii S1 sdhE FAD assembly factor SdhE
EHELCC_05405 EHELCC_05405 Morganella morganii S2 sdhE FAD assembly factor SdhE
NLDBIP_05725 NLDBIP_05725 Morganella morganii S4 sdhE FAD assembly factor SdhE
LHKJJB_02605 LHKJJB_02605 Morganella morganii S3 sdhE FAD assembly factor SdhE
HKOGLL_06080 HKOGLL_06080 Morganella morganii S5 sdhE FAD assembly factor SdhE
F4V73_RS08555 F4V73_RS08555 Morganella psychrotolerans sdhE FAD assembly factor SdhE
PMI_RS09940 PMI_RS09940 Proteus mirabilis HI4320 sdhE FAD assembly factor SdhE

Distribution of group_820 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_820 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_820

Orthogroup content: 7 members

Help

This page summarizes the annotation of all members of the orthologous group group_820.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 sdhE 7

Product

# Product Occurence
1 FAD assembly factor SdhE 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2938 7 O Posttranslational modification, protein turnover, chaperones (O) Succinate dehydrogenase flavin-adding protein, antitoxin component of the CptAB toxin-antitoxin module

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K09159 7 antitoxin CptB - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF03937 7 Flavinator of succinate dehydrogenase

Annotations of the 51 SwissProt hits

Annotation Number of occurrences
FAD assembly factor SdhE 49
Succinate dehydrogenase assembly factor 2, mitochondrial 2

Protein length

Min length 91
Max length 95
Mean length (sd) 94.3 (1.5)
Median length 95.0

Protein length distribution